Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301D12f
(516 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M33950-1|AAA28746.1| 260|Drosophila melanogaster protein ( D.me... 233 1e-61
AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p pro... 233 1e-61
AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB... 233 1e-61
AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA... 233 1e-61
AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-P... 167 8e-42
AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferatin... 167 8e-42
BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p pro... 122 4e-28
AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein. 59 4e-09
AE014297-1654|AAF54928.2| 1012|Drosophila melanogaster CG32473-P... 29 4.9
AY113414-1|AAM29419.1| 200|Drosophila melanogaster RE14949p pro... 28 8.6
AY071065-1|AAL48687.1| 200|Drosophila melanogaster RE14259p pro... 28 8.6
AE014134-1712|AAF52821.2| 200|Drosophila melanogaster CG4539-PA... 28 8.6
>M33950-1|AAA28746.1| 260|Drosophila melanogaster protein (
D.melanogaster proliferatingcell nuclear antigen (PCNA)
gene, complete cds. ).
Length = 260
Score = 233 bits (570), Expect = 1e-61
Identities = 108/134 (80%), Positives = 125/134 (93%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMN
Sbjct: 61 RCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMN 120
Query: 473 LDLEHLGIPETEYS 514
LD EHLGIPET++S
Sbjct: 121 LDQEHLGIPETDFS 134
>AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p
protein.
Length = 260
Score = 233 bits (570), Expect = 1e-61
Identities = 108/134 (80%), Positives = 125/134 (93%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMN
Sbjct: 61 RCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMN 120
Query: 473 LDLEHLGIPETEYS 514
LD EHLGIPET++S
Sbjct: 121 LDQEHLGIPETDFS 134
>AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB,
isoform B protein.
Length = 260
Score = 233 bits (570), Expect = 1e-61
Identities = 108/134 (80%), Positives = 125/134 (93%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMN
Sbjct: 61 RCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMN 120
Query: 473 LDLEHLGIPETEYS 514
LD EHLGIPET++S
Sbjct: 121 LDQEHLGIPETDFS 134
>AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA,
isoform A protein.
Length = 260
Score = 233 bits (570), Expect = 1e-61
Identities = 108/134 (80%), Positives = 125/134 (93%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMN
Sbjct: 61 RCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMN 120
Query: 473 LDLEHLGIPETEYS 514
LD EHLGIPET++S
Sbjct: 121 LDQEHLGIPETDFS 134
>AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-PA
protein.
Length = 255
Score = 167 bits (406), Expect = 8e-42
Identities = 69/134 (51%), Positives = 106/134 (79%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FES +E+ +DYE+KL+N
Sbjct: 61 HCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLN 120
Query: 473 LDLEHLGIPETEYS 514
LD +H+ IP+ +Y+
Sbjct: 121 LDQDHMEIPKKDYT 134
>AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferating
cell nuclear antigen2 protein.
Length = 255
Score = 167 bits (406), Expect = 8e-42
Identities = 69/134 (51%), Positives = 106/134 (79%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 292
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 293 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 472
CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FES +E+ +DYE+KL+N
Sbjct: 61 HCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLN 120
Query: 473 LDLEHLGIPETEYS 514
LD +H+ IP+ +Y+
Sbjct: 121 LDQDHMEIPKKDYT 134
>BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p
protein.
Length = 216
Score = 122 bits (293), Expect = 4e-28
Identities = 51/95 (53%), Positives = 74/95 (77%)
Frame = +2
Query: 230 MDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNV 409
MDNSHVSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D + +
Sbjct: 1 MDNSHVSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKI 60
Query: 410 TFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYS 514
T FES +E+ +DYE+KL+NLD +H+ IP+ +Y+
Sbjct: 61 TLSFESDGKERTADYELKLLNLDQDHMEIPKKDYT 95
>AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein.
Length = 36
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +2
Query: 113 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQ 220
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQ 36
>AE014297-1654|AAF54928.2| 1012|Drosophila melanogaster CG32473-PA,
isoform A protein.
Length = 1012
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 104 NINMFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGF 283
+IN+ E+R L L++VL K A+FDCD L ++ S++S + ADG
Sbjct: 202 SINLDESRELLLITLREVLSMNKAYTLSASFDCD-----LSSLVGSYISNYT---NADGV 253
Query: 284 DK 289
D+
Sbjct: 254 DR 255
>AY113414-1|AAM29419.1| 200|Drosophila melanogaster RE14949p
protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 460 HLVIRDFLLIWALKNKCDIVSIIL-CFYCNCI 368
H+V+ + +++KNK DIV ++ C Y CI
Sbjct: 71 HIVLDTNFINFSIKNKLDIVQGMMDCLYAKCI 102
>AY071065-1|AAL48687.1| 200|Drosophila melanogaster RE14259p
protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 460 HLVIRDFLLIWALKNKCDIVSIIL-CFYCNCI 368
H+V+ + +++KNK DIV ++ C Y CI
Sbjct: 71 HIVLDTNFINFSIKNKLDIVQGMMDCLYAKCI 102
>AE014134-1712|AAF52821.2| 200|Drosophila melanogaster CG4539-PA
protein.
Length = 200
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 460 HLVIRDFLLIWALKNKCDIVSIIL-CFYCNCI 368
H+V+ + +++KNK DIV ++ C Y CI
Sbjct: 71 HIVLDTNFINFSIKNKLDIVQGMMDCLYAKCI 102
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,181,627
Number of Sequences: 53049
Number of extensions: 415729
Number of successful extensions: 791
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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