Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D11f
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126796-1|BAC86698.1|  195|Homo sapiens protein ( Homo sapiens ...    31   2.3  
AB018311-1|BAA34488.1|  872|Homo sapiens KIAA0768 protein protein.     31   3.0  

>AK126796-1|BAC86698.1|  195|Homo sapiens protein ( Homo sapiens
          cDNA FLJ44846 fis, clone BRACE3051144. ).
          Length = 195

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 86 CATVCLWTSLCDCCC 42
          C  +CLW SLC+C C
Sbjct: 49 CGCLCLWVSLCECPC 63


>AB018311-1|BAA34488.1|  872|Homo sapiens KIAA0768 protein protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 66  PQTHSRTFFLINTNYYVIHFKLPHRITFYIS 158
           PQ HS +FF + TN +    + PHR + Y S
Sbjct: 754 PQDHSESFFPLLTNEHTEDLQSPHRDSLYTS 784


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,639,693
Number of Sequences: 237096
Number of extensions: 1008985
Number of successful extensions: 1242
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1237
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)