Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D09f
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012673-1|AAT09323.1|  876|Drosophila melanogaster SD07102p pro...    29   1.7  
AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p pro...    29   1.7  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    29   1.7  

>BT012673-1|AAT09323.1|  876|Drosophila melanogaster SD07102p
           protein.
          Length = 876

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 291 TESFQTLKRIMFRSKRSDLRHSDY 362
           TE+ + LKR++ RS+R  L H+DY
Sbjct: 841 TETVERLKRVLQRSQRGLLSHNDY 864


>AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p protein.
          Length = 1358

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 291  TESFQTLKRIMFRSKRSDLRHSDY 362
            TE+ + LKR++ RS+R  L H+DY
Sbjct: 1323 TETVERLKRVLQRSQRGLLSHNDY 1346


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
            protein.
          Length = 1734

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 291  TESFQTLKRIMFRSKRSDLRHSDY 362
            TE+ + LKR++ RS+R  L H+DY
Sbjct: 1699 TETVERLKRVLQRSQRGLLSHNDY 1722


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,241,672
Number of Sequences: 53049
Number of extensions: 232313
Number of successful extensions: 343
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)