Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D08f
         (386 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145615-1|AAD38590.1|  384|Drosophila melanogaster BcDNA.GH0337...    91   6e-19
AE014134-295|AAF51339.1|  384|Drosophila melanogaster CG17712-PA...    91   6e-19
AE014296-2358|AAX52746.1| 1052|Drosophila melanogaster CG32134-P...    29   2.1  
AE014296-2357|AAF49759.1| 1052|Drosophila melanogaster CG32134-P...    29   2.1  
X57746-1|CAA40912.1|  790|Drosophila melanogaster fibroblast  gr...    29   2.8  
X74031-1|CAA52190.1| 1052|Drosophila melanogaster FGF-receptor h...    27   8.5  
AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P...    27   8.5  

>AF145615-1|AAD38590.1|  384|Drosophila melanogaster BcDNA.GH03377
           protein.
          Length = 384

 Score = 90.6 bits (215), Expect = 6e-19
 Identities = 43/66 (65%), Positives = 50/66 (75%)
 Frame = +2

Query: 188 MLPGIGVFGTGAIAKVLVPFLKEKGFSVEAIWGITLQEAEIAAKELKIPFFTNKIDDVLL 367
           MLPG+GVFGTG IA VLVP L+EKGF V AIWG TL+EA+  A    + F TN IDDVLL
Sbjct: 1   MLPGVGVFGTGEIANVLVPLLREKGFEVRAIWGRTLKEAKETATTQNVQFHTNVIDDVLL 60

Query: 368 KKNVSL 385
           +K+V L
Sbjct: 61  RKDVDL 66


>AE014134-295|AAF51339.1|  384|Drosophila melanogaster CG17712-PA
           protein.
          Length = 384

 Score = 90.6 bits (215), Expect = 6e-19
 Identities = 43/66 (65%), Positives = 50/66 (75%)
 Frame = +2

Query: 188 MLPGIGVFGTGAIAKVLVPFLKEKGFSVEAIWGITLQEAEIAAKELKIPFFTNKIDDVLL 367
           MLPG+GVFGTG IA VLVP L+EKGF V AIWG TL+EA+  A    + F TN IDDVLL
Sbjct: 1   MLPGVGVFGTGEIANVLVPLLREKGFEVRAIWGRTLKEAKETATTQNVQFHTNVIDDVLL 60

Query: 368 KKNVSL 385
           +K+V L
Sbjct: 61  RKDVDL 66


>AE014296-2358|AAX52746.1| 1052|Drosophila melanogaster CG32134-PB,
           isoform B protein.
          Length = 1052

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -3

Query: 243 GTRTLAIAPVPKTPIPGNIVLTLFSLTFNKVRLQTC*VQSNLIECNSSKFL 91
           G +++ I  +  T    ++VLTL ++TF++    TC   S L   NSS +L
Sbjct: 531 GLKSVEIQNLNFTVTNDSVVLTLRNVTFDQEGWYTCLASSGLGRSNSSVYL 581


>AE014296-2357|AAF49759.1| 1052|Drosophila melanogaster CG32134-PA,
           isoform A protein.
          Length = 1052

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -3

Query: 243 GTRTLAIAPVPKTPIPGNIVLTLFSLTFNKVRLQTC*VQSNLIECNSSKFL 91
           G +++ I  +  T    ++VLTL ++TF++    TC   S L   NSS +L
Sbjct: 531 GLKSVEIQNLNFTVTNDSVVLTLRNVTFDQEGWYTCLASSGLGRSNSSVYL 581


>X57746-1|CAA40912.1|  790|Drosophila melanogaster fibroblast
           growth factor receptor protein.
          Length = 790

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -3

Query: 243 GTRTLAIAPVPKTPIPGNIVLTLFSLTFNKVRLQTC*VQSNLIECNSSKFL 91
           G +++ I  +  T    ++VLTL ++TF++    TC   S L   NSS +L
Sbjct: 270 GLQSVEIQNLNFTVTNDSVVLTLRNVTFDQEGWYTCLASSGLGRSNSSVYL 320


>X74031-1|CAA52190.1| 1052|Drosophila melanogaster FGF-receptor
           homologue protein.
          Length = 1052

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -3

Query: 243 GTRTLAIAPVPKTPIPGNIVLTLFSLTFNKVRLQTC*VQSNLIECNSSKFL 91
           G +++ I  +  T    ++VLTL ++TF++    +C   S L   NSS +L
Sbjct: 531 GLQSVEIQNLNFTVTNDSVVLTLRNVTFDQEGWYSCLASSGLGRSNSSVYL 581


>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
           protein.
          Length = 1317

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -3

Query: 309 ISASCKVIPHIAS-TENPFSFKKGTRTLAIAPVPK 208
           IS SC  IPHIAS  E P + K    ++  +P  K
Sbjct: 809 ISGSCTPIPHIASPKEQPINHKDPCHSVDPSPPEK 843


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,434,515
Number of Sequences: 53049
Number of extensions: 293168
Number of successful extensions: 780
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)