Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D07f
         (342 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E46C9F Cluster: PREDICTED: similar to leukocyte ...    32   2.9  
UniRef50_Q3MPA3 Cluster: Putative uncharacterized protein CaJ7.0...    31   3.8  
UniRef50_Q57YC1 Cluster: Transporter protein, putative; n=1; Try...    31   5.0  

>UniRef50_UPI0000E46C9F Cluster: PREDICTED: similar to leukocyte
           receptor cluster (LRC) member 1, partial; n=3;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           leukocyte receptor cluster (LRC) member 1, partial -
           Strongylocentrotus purpuratus
          Length = 391

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 181 KRKMSTSPTMTMMRATGRREKCMTPTSIIIESNVAVNMKSQ 303
           KRK S  P   M+R  G++ K +T T   I+ N ++  + Q
Sbjct: 172 KRKASMDPMNAMLRYLGKKPKSVTETKTTIQQNSSIEKECQ 212


>UniRef50_Q3MPA3 Cluster: Putative uncharacterized protein
           CaJ7.0283; n=3; Candida albicans|Rep: Putative
           uncharacterized protein CaJ7.0283 - Candida albicans
           (Yeast)
          Length = 837

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = -2

Query: 275 DSMMIDVGVIHFSLLPVARIIVIVGLVDIFLFVPRFVDDLSDRDRHQQQPDYRTHLALSM 96
           +S+ I   ++H  L P+A  +VI  + D+ +  P  + + S     +QQ  +R HL L +
Sbjct: 659 NSVSIFTNILHKVLKPLAEKVVIF-VDDVCILGPN-IQEYSTLTVSEQQKSHRQHLDLVL 716

Query: 95  RFHN*IQQTNIEL-PNNYIYMKN*MTF 18
           +  N ++Q  +++ P+      N  TF
Sbjct: 717 QVLNLLKQAGLKINPSKLTIGVNSATF 743


>UniRef50_Q57YC1 Cluster: Transporter protein, putative; n=1;
           Trypanosoma brucei|Rep: Transporter protein, putative -
           Trypanosoma brucei
          Length = 534

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -2

Query: 227 VARIIVIVGLVDIFLFVPRFVDDLSDRDR 141
           V+R ++ V L  IF++VP +VDD + RDR
Sbjct: 140 VSRFLIGVTLSFIFVYVPVWVDDFAPRDR 168


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,501,931
Number of Sequences: 1657284
Number of extensions: 2994566
Number of successful extensions: 8140
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8140
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)