Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D07f
         (342 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY050231-1|AAK84930.1|  559|Drosophila melanogaster SD01637p pro...    27   6.4  
AE013599-2745|AAO41350.1| 1497|Drosophila melanogaster CG15086-P...    27   6.4  
AE013599-2744|AAO41349.1| 2087|Drosophila melanogaster CG15086-P...    27   6.4  
AE013599-2743|AAF57655.1| 1908|Drosophila melanogaster CG15086-P...    27   6.4  
AE013599-2399|AAS64825.1|  559|Drosophila melanogaster CG8963-PB...    27   6.4  
AE013599-2398|AAF57917.1|  559|Drosophila melanogaster CG8963-PA...    27   6.4  
AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-P...    27   8.4  

>AY050231-1|AAK84930.1|  559|Drosophila melanogaster SD01637p
           protein.
          Length = 559

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 176 PRFVDDLSDR-DRHQQQPDYRTHLALSMRFHN*IQQTNIELPN 51
           PR+V+       +H QQP Y  H     +F+N +Q+    + N
Sbjct: 114 PRYVNGFKHHHQQHHQQPHYNHHHNHQQKFNNDMQKLTNSVQN 156


>AE013599-2745|AAO41350.1| 1497|Drosophila melanogaster CG15086-PC,
            isoform C protein.
          Length = 1497

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 219  ASYRKKREVYDPNIDHHRVKRCCEYEKSRK 308
            AS+ K    + PN + HR KR C    SRK
Sbjct: 1308 ASHNKTPSFFLPNCEEHRCKRNCNGLCSRK 1337


>AE013599-2744|AAO41349.1| 2087|Drosophila melanogaster CG15086-PB,
            isoform B protein.
          Length = 2087

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 219  ASYRKKREVYDPNIDHHRVKRCCEYEKSRK 308
            AS+ K    + PN + HR KR C    SRK
Sbjct: 1898 ASHNKTPSFFLPNCEEHRCKRNCNGLCSRK 1927


>AE013599-2743|AAF57655.1| 1908|Drosophila melanogaster CG15086-PA,
            isoform A protein.
          Length = 1908

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 219  ASYRKKREVYDPNIDHHRVKRCCEYEKSRK 308
            AS+ K    + PN + HR KR C    SRK
Sbjct: 1719 ASHNKTPSFFLPNCEEHRCKRNCNGLCSRK 1748


>AE013599-2399|AAS64825.1|  559|Drosophila melanogaster CG8963-PB,
           isoform B protein.
          Length = 559

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 176 PRFVDDLSDR-DRHQQQPDYRTHLALSMRFHN*IQQTNIELPN 51
           PR+V+       +H QQP Y  H     +F+N +Q+    + N
Sbjct: 114 PRYVNGFKHHHQQHHQQPHYNHHHNHQQKFNNDMQKLTNSVQN 156


>AE013599-2398|AAF57917.1|  559|Drosophila melanogaster CG8963-PA,
           isoform A protein.
          Length = 559

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 176 PRFVDDLSDR-DRHQQQPDYRTHLALSMRFHN*IQQTNIELPN 51
           PR+V+       +H QQP Y  H     +F+N +Q+    + N
Sbjct: 114 PRYVNGFKHHHQQHHQQPHYNHHHNHQQKFNNDMQKLTNSVQN 156


>AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-PA
           protein.
          Length = 804

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 172 RGTKRKMSTSPTMTMMRATGRREKCMTPTSIIIESNVAVNMKSQENDARQLS 327
           R + R+  + P M  ++    R    TP    + S    N+K Q    RQLS
Sbjct: 418 RPSPRRPKSPPVMATLQLPSSRTTSPTPAEPPVASAGLQNLKRQHTPERQLS 469


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,642,899
Number of Sequences: 53049
Number of extensions: 145487
Number of successful extensions: 486
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)