Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D06f
         (437 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17979-1|CAA76988.1|  575|Homo sapiens glycoprotein 6-alpha-L-fu...    29   5.3  
Y17978-1|CAA76987.1|  575|Homo sapiens glycoprotein 6-alpha-L-fu...    29   5.3  
Y17977-1|CAA76986.1|  575|Homo sapiens glycoprotein 6-alpha-L-fu...    29   5.3  
Y17976-1|CAA76985.1|  575|Homo sapiens glycoprotein 6-alpha-L-fu...    29   5.3  
D89289-1|BAA19764.1|  575|Homo sapiens N-Acetyl-beta-D-glucosami...    29   5.3  
BC142958-1|AAI42959.1|  308|Homo sapiens FUT8 protein protein.         29   5.3  
AJ539536-1|CAD62445.1|  575|Homo sapiens alpha6-fucosyltransfera...    29   5.3  
AJ539535-1|CAD62444.1|  575|Homo sapiens alpha6-fucosyltransfera...    29   5.3  
AJ536056-1|CAD59927.1|  575|Homo sapiens alpha6-fucosyltransfera...    29   5.3  
AJ536055-1|CAD59926.1|  575|Homo sapiens alpha6-fucosyltransfera...    29   5.3  
AJ536054-1|CAD59925.1|  575|Homo sapiens alpha6-fucosyltransfera...    29   5.3  
AJ536053-1|CAD59924.1|  575|Homo sapiens alpha6-fucosyltransfera...    29   5.3  
AB049740-1|BAB40929.2|  308|Homo sapiens alpha 1,6-fucosyltransf...    29   5.3  
AB032573-1|BAA92858.1|  276|Homo sapiens alpha1,6 fucosyltransfe...    29   5.3  

>Y17979-1|CAA76988.1|  575|Homo sapiens glycoprotein
           6-alpha-L-fucosyltransferase protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>Y17978-1|CAA76987.1|  575|Homo sapiens glycoprotein
           6-alpha-L-fucosyltransferase protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>Y17977-1|CAA76986.1|  575|Homo sapiens glycoprotein
           6-alpha-L-fucosyltransferase protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>Y17976-1|CAA76985.1|  575|Homo sapiens glycoprotein
           6-alpha-L-fucosyltransferase protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>D89289-1|BAA19764.1|  575|Homo sapiens
           N-Acetyl-beta-D-glucosaminide protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>BC142958-1|AAI42959.1|  308|Homo sapiens FUT8 protein protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>AJ539536-1|CAD62445.1|  575|Homo sapiens alpha6-fucosyltransferase
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>AJ539535-1|CAD62444.1|  575|Homo sapiens alpha6-fucosyltransferase
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>AJ536056-1|CAD59927.1|  575|Homo sapiens alpha6-fucosyltransferase
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>AJ536055-1|CAD59926.1|  575|Homo sapiens alpha6-fucosyltransferase
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>AJ536054-1|CAD59925.1|  575|Homo sapiens alpha6-fucosyltransferase
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>AJ536053-1|CAD59924.1|  575|Homo sapiens alpha6-fucosyltransferase
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>AB049740-1|BAB40929.2|  308|Homo sapiens alpha
           1,6-fucosyltransferase protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


>AB032573-1|BAA92858.1|  276|Homo sapiens alpha1,6
           fucosyltransferase protein.
          Length = 276

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  ICMINIKCLF*GYGCILYNIYYIFFIA 108
           +C IN  C   GYGC L+++ Y F IA
Sbjct: 211 VCNINKGC---GYGCQLHHVVYCFMIA 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,800,607
Number of Sequences: 237096
Number of extensions: 972937
Number of successful extensions: 1312
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)