BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS301D04f (358 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 20 6.6 EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 20 8.7 EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 20 8.7 EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 20 8.7 EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 20 8.7 EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 20 8.7 EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 20 8.7 >DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome adhesion molecule splicevariant 3.12.3.1 protein. Length = 1639 Score = 20.2 bits (40), Expect = 6.6 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +3 Query: 84 PHVYKSVQPNGSDLPMND 137 P YK +PN D+ + D Sbjct: 740 PGDYKDFKPNNPDIKVED 757 >EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering hormone receptorisoform A protein. Length = 434 Score = 19.8 bits (39), Expect = 8.7 Identities = 6/8 (75%), Positives = 8/8 (100%) Frame = -1 Query: 304 FWSALWFI 281 FWSAL+F+ Sbjct: 232 FWSALYFL 239 >EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 311 Score = 19.8 bits (39), Expect = 8.7 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +3 Query: 144 TLRYYYNLGVECM 182 TL Y++NL V C+ Sbjct: 211 TLYYFFNLIVPCV 223 >EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 311 Score = 19.8 bits (39), Expect = 8.7 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +3 Query: 144 TLRYYYNLGVECM 182 TL Y++NL V C+ Sbjct: 211 TLYYFFNLIVPCV 223 >EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 311 Score = 19.8 bits (39), Expect = 8.7 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +3 Query: 144 TLRYYYNLGVECM 182 TL Y++NL V C+ Sbjct: 211 TLYYFFNLIVPCV 223 >EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 311 Score = 19.8 bits (39), Expect = 8.7 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +3 Query: 144 TLRYYYNLGVECM 182 TL Y++NL V C+ Sbjct: 211 TLYYFFNLIVPCV 223 >EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 311 Score = 19.8 bits (39), Expect = 8.7 Identities = 7/13 (53%), Positives = 10/13 (76%) Frame = +3 Query: 144 TLRYYYNLGVECM 182 TL Y++NL V C+ Sbjct: 211 TLYYFFNLIVPCV 223 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 53,655 Number of Sequences: 336 Number of extensions: 804 Number of successful extensions: 7 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 122,585 effective HSP length: 50 effective length of database: 105,785 effective search space used: 7193380 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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