Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C12f
         (316 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    26   0.11 
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   0.43 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   2.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   4.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   5.4  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    19   9.4  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 25.8 bits (54), Expect = 0.11
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -2

Query: 228 EPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*T 61
           +P  VI + T  PS  L+NR G+      A+         P T+T++ T +  + T
Sbjct: 123 KPSGVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPPTTSTTTRTTLTTKFT 178


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 0.43
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = +2

Query: 26  KLKMVSKAELACVYSALILVDD--------DVAVTGEKISTILKAAAVDVEPYWPGLFAK 181
           ++KM  K EL C+ + ++   D        +V +  EKI  +L+       P  PG FAK
Sbjct: 305 EMKM-DKTELGCLRAIILYNPDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEPGRFAK 363

Query: 182 AL 187
            L
Sbjct: 364 LL 365


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 205 TDIDAFQGFGEQTWPI 158
           TD+D F+G     WP+
Sbjct: 515 TDLDDFKGVCGMKWPL 530


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +2

Query: 86  DDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 217
           + D+A+TG+   +I +   +    Y+  L    L  I    L T
Sbjct: 373 NSDIAITGKNFFSITRGLILSFVDYFVFLLCSILVNIAFIKLAT 416


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = -2

Query: 237 PTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAA 133
           P P+P + +       +  L   PG   +++T+ A
Sbjct: 80  PEPDPEIPVAPEPAPLASPLVQEPGSSTTSATSGA 114


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 107 QLRQHHHPPG*EQSKHMLIQLLTPFLVLNVQV 12
           QL  HH PP   Q +  ++    P     +QV
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCNPQLQV 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,394
Number of Sequences: 336
Number of extensions: 1534
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)