Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C12f
(316 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89... 89 9e-19
02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799... 29 0.58
02_05_0772 - 31643142-31643329,31643650-31643683,31644037-316442... 28 1.8
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 27 3.1
06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155,332... 27 4.1
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 26 5.4
07_01_0738 + 5626062-5626862 26 5.4
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 26 7.1
07_03_1604 - 28089032-28089079,28089161-28089371,28089484-280898... 26 7.1
06_01_0025 - 244068-244177,244279-244333,244500-244527,244621-24... 26 7.1
03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435 26 7.1
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 25 9.4
08_01_0977 - 9839362-9839524,9839656-9839744 25 9.4
07_03_1354 - 25972597-25973787,25974381-25974680 25 9.4
07_03_0587 + 19708841-19709282,19709693-19709883,19710429-197105... 25 9.4
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 25 9.4
05_01_0555 + 4867494-4867577,4868987-4869607 25 9.4
04_04_0223 - 23723055-23723223,23723316-23723424,23723588-237236... 25 9.4
02_05_0996 - 33380363-33380597,33380767-33380851,33381206-333815... 25 9.4
01_01_0743 - 5763654-5766902 25 9.4
>08_01_0113 +
897970-898038,898148-898271,898811-898896,898996-899049
Length = 110
Score = 88.6 bits (210), Expect = 9e-19
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +2
Query: 38 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLIT 217
+S +E+AC +ALIL DD + +T EKI+T++KAA + VE YWPGLFAK LE +V DLI
Sbjct: 1 MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLIL 60
Query: 218 NIGSGVGAAP 247
++GSG GAAP
Sbjct: 61 SVGSGGGAAP 70
>02_02_0220 -
7992124-7992351,7992458-7992562,7993499-7993711,
7993937-7994196,7994425-7994701,7995226-7995371,
7995519-7995903,7996680-7996964
Length = 632
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 2 GLRQLARSKLKMVSKAELACVYSALILVDDDVAVTGEKIST 124
G+R+LA+ V+K + S +L+ +DVA+TG+ ++T
Sbjct: 249 GIRKLAQIFQSSVAKKKAVGKKSKALLLGEDVAITGDCVTT 289
>02_05_0772 -
31643142-31643329,31643650-31643683,31644037-31644221,
31644483-31645146
Length = 356
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/25 (60%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = -3
Query: 314 FFLXLLGRSAGCSSS---GWRSTXR 249
FFL LL S CSSS GWR+T R
Sbjct: 301 FFLHLLSLSLFCSSSGSGGWRATAR 325
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 27.1 bits (57), Expect = 3.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 110 HQLRQHHHPPG*EQSKH 60
HQ R+HHHPP + H
Sbjct: 562 HQRRRHHHPPAWDVEGH 578
>06_01_0469 +
3322886-3323564,3324033-3324953,3325025-3325155,
3325237-3325317,3328173-3328820
Length = 819
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +2
Query: 11 QLARSKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALE 190
Q A LK K +AC L+LV DD T T+ KA A D+ G +AL
Sbjct: 657 QAADHALKRQVKHSVACGVDWLVLVSDDSDFT----DTVRKARAADLRTVVVGDGCRALG 712
Query: 191 GI 196
+
Sbjct: 713 SV 714
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 184 GFGEQTWPIW--LYIYSRRFQDGGNFLTSYG 98
G G+ +W +Y +S + QDG NF+ G
Sbjct: 627 GAGKGLMTVWHAMYSHSSKIQDGSNFIDETG 657
>07_01_0738 + 5626062-5626862
Length = 266
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -2
Query: 231 PEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 82
P+ L R RT++ K L Q T + A + P ATS+ST
Sbjct: 102 PDSPLASRIRTILTHKKLKKSMPQPTITFSTAVYHHARSTVPAAATSTST 151
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 25.8 bits (54), Expect = 7.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 158 MALHLQPPLSRWWKFSHQLRQHHHPP 81
+ LH +P L W +F +QH P
Sbjct: 4466 LVLHFEPYLMNWSEFDQLQKQHEENP 4491
>07_03_1604 -
28089032-28089079,28089161-28089371,28089484-28089853,
28090034-28090199
Length = 264
Score = 25.8 bits (54), Expect = 7.1
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 60 VFTLLSSWWMMMLP 101
+F+++SSWWM LP
Sbjct: 30 LFSIISSWWMNPLP 43
>06_01_0025 -
244068-244177,244279-244333,244500-244527,244621-244691,
244829-244926,245069-245186,245573-245636,245744-245808,
245893-245928,246255-246311,246422-246691
Length = 323
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 182 LWRTDLANMALHLQPPLSRWWKFSHQLRQH 93
+W+TD H + L W F H+LRQH
Sbjct: 234 VWQTDCIARVSH-EDGLVVGWIFLHELRQH 262
>03_05_0033 - 20048994-20050049,20050131-20050210,20050324-20050435
Length = 415
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 32 KMVSKAELACVYSALILVDDDVAVTGEKIS---TILKAAAVDVEPYWPGLFAKALEGI 196
+++ +L V + + +VD + T +++ I KA V+ + PGL AKA GI
Sbjct: 155 RVLEGEKLPVVTAKITMVDLPLGATEDRVCGTIDIEKALTDGVKAFEPGLLAKANRGI 212
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 153 STSTAAAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFSFER 19
+TS+ AA + ATSSS A H S+F +FS R
Sbjct: 302 ATSSTAAPPAAPSSGGIAATSSSAAAAAAPDHRPSSFAALFSSPR 346
>08_01_0977 - 9839362-9839524,9839656-9839744
Length = 83
Score = 25.4 bits (53), Expect = 9.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 77 ILVDDDVAVTGEKISTILKAAAVDVEP 157
IL + A GE ST + AAVDVEP
Sbjct: 44 ILNREAAAAAGEAGSTTREEAAVDVEP 70
>07_03_1354 - 25972597-25973787,25974381-25974680
Length = 496
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 WPGLFAKALEGINVRDLITNIGSGVGAAP 247
W L A ALE IN+R L+ +G+ A P
Sbjct: 136 WRYLEADALEDINLRCLLLRMGARSTATP 164
>07_03_0587 +
19708841-19709282,19709693-19709883,19710429-19710568,
19710955-19711380,19711540-19712685,19712805-19712934,
19713257-19713492,19713575-19713710,19713793-19713869,
19714692-19714798,19714896-19714996
Length = 1043
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 41 SKAELACVYSALILVDDDVAVTG 109
S ++ CV S+ +++DDD+ + G
Sbjct: 544 SLSQCLCVRSSSVIIDDDLVIVG 566
>07_03_0537 - 19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 165 GQYGSTSTAAAFKMVEIFSPVTATSSS 85
G +G T+ AAA ++F+P T +S
Sbjct: 942 GDHGHTADAAAAAAADVFTPATMARAS 968
>05_01_0555 + 4867494-4867577,4868987-4869607
Length = 234
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 210 RSRTLMPSKALANRPGQYGSTSTAAA--FKMVEIFSPVTATSSS 85
R +MP+ A+ R +G TST A F ++ ++ PVT +S S
Sbjct: 175 RVAAVMPAPAM--RAAVWGMTSTVAVAGFYLLFVYRPVTISSYS 216
>04_04_0223 -
23723055-23723223,23723316-23723424,23723588-23723690,
23723781-23723812,23724024-23724241,23724322-23724437,
23725055-23725310,23725719-23725806,23725928-23726005,
23726199-23726274,23726525-23726583,23727715-23728066
Length = 551
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 178 GEQTWPIWLYIYSRRFQDGGNFL-TSYGNIIIHQDESRVN 62
G Q WLY+Y + F+D ++ +YGN ++ E+ V+
Sbjct: 423 GPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYITENGVD 462
>02_05_0996 -
33380363-33380597,33380767-33380851,33381206-33381557,
33381690-33382340
Length = 440
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/41 (21%), Positives = 21/41 (51%)
Frame = -3
Query: 137 PLSRWWKFSHQLRQHHHPPG*EQSKHMLIQLLTPFLVLNVQ 15
P+ +WWK +++R+ P + H ++ F+ +N +
Sbjct: 214 PVKKWWKERNEVREGGTPRSPAKLSHPIMSRAGEFVRMNAK 254
>01_01_0743 - 5763654-5766902
Length = 1082
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 118 FHHLESGGCRCR 153
FHH E G C CR
Sbjct: 1068 FHHFEEGRCSCR 1079
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,866,242
Number of Sequences: 37544
Number of extensions: 191873
Number of successful extensions: 539
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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