Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C12f
(316 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 134 2e-32
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 134 2e-32
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 134 2e-32
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 128 1e-30
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 29 1.3
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 29 1.7
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 28 2.9
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 28 2.9
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro... 27 3.8
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro... 27 3.8
AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p pro... 27 3.8
AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p pro... 27 3.8
AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA... 27 3.8
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA... 27 3.8
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,... 27 3.8
BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p pro... 27 6.7
AY118407-1|AAM48436.1| 282|Drosophila melanogaster RE62293p pro... 27 6.7
AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p pro... 27 6.7
AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB... 27 6.7
AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA... 27 6.7
AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA... 27 6.7
BT022134-1|AAY51529.1| 543|Drosophila melanogaster IP08802p pro... 26 8.8
AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p pro... 26 8.8
AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB... 26 8.8
AE014134-2970|AAF53700.1| 530|Drosophila melanogaster CG10348-P... 26 8.8
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 134 bits (325), Expect = 2e-32
Identities = 64/72 (88%), Positives = 70/72 (97%)
Frame = +2
Query: 35 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 214
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 215 TNIGSGVGAAPA 250
TNIGSGVGAAPA
Sbjct: 61 TNIGSGVGAAPA 72
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 134 bits (325), Expect = 2e-32
Identities = 64/72 (88%), Positives = 70/72 (97%)
Frame = +2
Query: 35 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 214
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 215 TNIGSGVGAAPA 250
TNIGSGVGAAPA
Sbjct: 61 TNIGSGVGAAPA 72
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 134 bits (325), Expect = 2e-32
Identities = 64/72 (88%), Positives = 70/72 (97%)
Frame = +2
Query: 35 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 214
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 215 TNIGSGVGAAPA 250
TNIGSGVGAAPA
Sbjct: 61 TNIGSGVGAAPA 72
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 128 bits (309), Expect = 1e-30
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = +2
Query: 35 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 214
M +KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 215 TNIGSGVGAAPA 250
TNIGSGVGAAPA
Sbjct: 61 TNIGSGVGAAPA 72
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -2
Query: 216 VIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEI 115
+I S+ L+P+K N P QY T+ A K +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 207 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 79
S+ +P+K N P QY T+ A K + SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 207 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 79
S+ +P+K N P QY T+ A K + SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 207 SRTLMPSKALANRPGQYGSTSTAAAFKMVEI 115
S+ L+P+K N P QY T+ A K +I
Sbjct: 258 SQNLVPAKTHINTPTQYNDTNATNALKTAKI 288
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 207 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 79
S+ +P+K N P QY T+ A K + SP S T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 207 SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTR 79
S+ +P+K N P QY T+ A K + SP S T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein.
Length = 1840
Score = 27.5 bits (58), Expect = 3.8
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 234 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 82
TP S + + A+ PGQ +TS+ A S T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein.
Length = 1840
Score = 27.5 bits (58), Expect = 3.8
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 234 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 82
TP S + + A+ PGQ +TS+ A S T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p
protein.
Length = 934
Score = 27.5 bits (58), Expect = 3.8
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 234 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 82
TP S + + A+ PGQ +TS+ A S T+TSSST
Sbjct: 632 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 682
>AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p protein.
Length = 1712
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 173 TDLANMALHLQPPLSRWWKFSHQLRQHHH 87
+ ++N +L+L+ P K H R+HHH
Sbjct: 969 SSISNQSLNLEEPPPPMGKHHHHHREHHH 997
>AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA
protein.
Length = 1712
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 173 TDLANMALHLQPPLSRWWKFSHQLRQHHH 87
+ ++N +L+L+ P K H R+HHH
Sbjct: 969 SSISNQSLNLEEPPPPMGKHHHHHREHHH 997
>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
protein.
Length = 1837
Score = 27.5 bits (58), Expect = 3.8
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 234 TPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSST 82
TP S + + A+ PGQ +TS+ A S T+TSSST
Sbjct: 1535 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1585
>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
isoform B protein.
Length = 2833
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 164 ANMALHLQPPLSRWWKFSHQLRQHHH 87
AN A+H P H+ RQHHH
Sbjct: 1835 ANPAMHFVSPFKSLENLLHEDRQHHH 1860
>BT023805-1|AAZ66312.1| 623|Drosophila melanogaster RE55817p
protein.
Length = 623
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 1 RPTATCTFKTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRC 150
RP C + VK + CL C H G W E + + GC+C
Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611
>AY118407-1|AAM48436.1| 282|Drosophila melanogaster RE62293p
protein.
Length = 282
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 225 PMLVIRSRTLMPS-KALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRA 70
P+++I ++ + S + + G+ STS+AA F + +T+T STR A
Sbjct: 166 PLVLIANKVDLESQRRVTTEEGRNLSTSSAARFLRHRLHCVITSTRHSTRWSA 218
>AY069787-1|AAL39932.1| 623|Drosophila melanogaster SD02907p
protein.
Length = 623
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 1 RPTATCTFKTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRC 150
RP C + VK + CL C H G W E + + GC+C
Sbjct: 563 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 611
>AE014134-2026|AAS64677.1| 969|Drosophila melanogaster CG4705-PB,
isoform B protein.
Length = 969
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 1 RPTATCTFKTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRC 150
RP C + VK + CL C H G W E + + GC+C
Sbjct: 909 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 957
>AE014134-2025|AAF53065.2| 989|Drosophila melanogaster CG4705-PA,
isoform A protein.
Length = 989
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 1 RPTATCTFKTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRC 150
RP C + VK + CL C H G W E + + GC+C
Sbjct: 929 RPVLFCVL-CRLPVKGAANACLACGHGGHIDHMMQWFEKHNVCATCGCKC 977
>AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA
protein.
Length = 1201
Score = 26.6 bits (56), Expect = 6.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -2
Query: 237 PTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*TH 58
PT + I++ + P+KA+ ++PG S + AA + +SSS + A T
Sbjct: 1124 PTKSAVKPIKAGSTSPTKAVVSKPG--ASAAKTAAASAATATATAAGSSSSNKKAATSTA 1181
Query: 57 A 55
A
Sbjct: 1182 A 1182
>BT022134-1|AAY51529.1| 543|Drosophila melanogaster IP08802p
protein.
Length = 543
Score = 26.2 bits (55), Expect = 8.8
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = -2
Query: 237 PTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*TH 58
P+P+ V + L+P+ +++ P S+++ AA SP T TS++T R + H
Sbjct: 16 PSPKQGCVYPALGLIPTSYISHVPYDLASSASVAATSSSST-SP-TTTSATTTGRLQHQH 73
Query: 57 ANSAFDTI 34
++ T+
Sbjct: 74 SHQQHQTL 81
>AY075346-1|AAL68207.1| 1052|Drosophila melanogaster GH20978p
protein.
Length = 1052
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -2
Query: 237 PTPEPMLVIR---SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMR 73
P P+P+ V+ + T M + + A G STS++++ S T++SSS+ R
Sbjct: 56 PPPQPIQVVAGSTTATTMSTASAARVSGAAASTSSSSSSSSSSQCSSQTSSSSSSHTR 113
>AE014296-1367|AAN12011.1| 1052|Drosophila melanogaster CG7915-PB,
isoform B protein.
Length = 1052
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -2
Query: 237 PTPEPMLVIR---SRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMR 73
P P+P+ V+ + T M + + A G STS++++ S T++SSS+ R
Sbjct: 56 PPPQPIQVVAGSTTATTMSTASAARVSGAAASTSSSSSSSSSSQCSSQTSSSSSSHTR 113
>AE014134-2970|AAF53700.1| 530|Drosophila melanogaster CG10348-PA
protein.
Length = 530
Score = 26.2 bits (55), Expect = 8.8
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = -2
Query: 237 PTPEPMLVIRSRTLMPSKALANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRMRAE*TH 58
P+P+ V + L+P+ +++ P S+++ AA SP T TS++T R + H
Sbjct: 3 PSPKQGCVYPALGLIPTSYISHVPYDLASSASVAATSSSST-SP-TTTSATTTGRLQHQH 60
Query: 57 ANSAFDTI 34
++ T+
Sbjct: 61 SHQQHQTL 68
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,026,881
Number of Sequences: 53049
Number of extensions: 299333
Number of successful extensions: 1037
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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