Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C11f
         (408 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.50 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   3.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 97  SRTRIMHKNLKAKEEGQCSNGSCKI 171
           ++TR++H++L A+    C N + K+
Sbjct: 609 AKTRVVHRDLAARNVLVCENHTVKV 633


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 385 ALKRISTLTFSCLNRCQIQNHCCSLNQTRS 296
           A KR+STL+   +    + N+ C  + + S
Sbjct: 656 ASKRVSTLSIDNVQSTHVGNYTCLASNSAS 685


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 41  SLDTGAMSARANARS*FVLHVHESCIRI*KPKKKVNAA 154
           S+D GA+ A   ++   +L   E C+++  P+K   AA
Sbjct: 311 SID-GALEAGPYSKEEGLLSYPEVCVKLANPQKLTTAA 347


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 184 FSCWVSCSCHCCIDLLLW 131
           FS WV C     I L+ W
Sbjct: 75  FSAWVRCQDQILIFLVNW 92


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 364  LTFSCLNRC 338
            +TF C NRC
Sbjct: 1107 ITFGCSNRC 1115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,438
Number of Sequences: 336
Number of extensions: 1155
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)