Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C11f
         (408 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   9.4  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 105 TNHA*ESESQRRRSMQQWQLQDTQQEK 185
           T H   ++  +++  QQ Q Q  QQ++
Sbjct: 431 TQHVINAQQPQQQQQQQQQQQQQQQQQ 457


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = -3

Query: 190 HAFSCWVSCSCHCCIDLLL 134
           H    W++C   CC   +L
Sbjct: 107 HLCKLWLTCDVLCCTASIL 125


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = -3

Query: 190 HAFSCWVSCSCHCCIDLLL 134
           H    W++C   CC   +L
Sbjct: 107 HLCKLWLTCDVLCCTASIL 125


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = -3

Query: 190 HAFSCWVSCSCHCCIDLLL 134
           H    W++C   CC   +L
Sbjct: 107 HLCKLWLTCDVLCCTASIL 125


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 172 VSCSCHCCIDL 140
           +SC C CC +L
Sbjct: 9   MSCCCWCCDNL 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,403
Number of Sequences: 438
Number of extensions: 1186
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)