Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C10f
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   3.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   3.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   3.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   3.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.6  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 380 LTLYSITPFGVSVFVILFT 324
           +T YSI+ F V + V++FT
Sbjct: 204 VTWYSISVFMVPLVVLIFT 222


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 241 MLCINLVHHFIELVKASYNLE*EL 312
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 251 LLCDSVAHTAGELLGAVYSLDLEL 274


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 241 MLCINLVHHFIELVKASYNLE*EL 312
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 251 LLCDSVAHTAGELLGAVYSLDLEL 274


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 241 MLCINLVHHFIELVKASYNLE*EL 312
           +LC ++ H   EL+ A Y+L+ EL
Sbjct: 571 LLCDSVAHTAGELLGAVYSLDLEL 594


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 139 FSRL*RKSRIENKPGKHLYFAYVIPQPVECI 47
           F R   KS+ E K     YF Y    PV+C+
Sbjct: 37  FIRALGKSKKEFKT--RTYFIYAFVAPVKCL 65


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 139 FSRL*RKSRIENKPGKHLYFAYVIPQPVECI 47
           F R   KS+ E K     YF Y    PV+C+
Sbjct: 270 FIRALGKSKKEFKT--RTYFIYAFVAPVKCL 298


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 139 FSRL*RKSRIENKPGKHLYFAYVIPQPVECI 47
           F R   KS+ E K     YF Y    PV+C+
Sbjct: 270 FIRALGKSKKEFKT--RTYFIYAFVAPVKCL 298


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -2

Query: 117 VASKISQGSISILHT*YLNLLNASKHLIIHRQ 22
           + +KIS  + S++H+ +LN     +H  +H +
Sbjct: 187 IRNKISNLNTSLIHSTHLNGDIVKEHQNLHNK 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,923
Number of Sequences: 336
Number of extensions: 1678
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)