Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C10f
         (388 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023165-1|AAY55581.1|  580|Drosophila melanogaster IP03406p pro...    28   3.7  
AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH1217...    28   3.7  
AE014297-3741|AAF56421.2|  807|Drosophila melanogaster CG13664-P...    28   3.7  
AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA ...    28   3.7  
AE014134-1855|AAF52927.2|  287|Drosophila melanogaster CG5056-PA...    28   4.9  
BT016038-1|AAV36923.1|  855|Drosophila melanogaster RE01051p pro...    27   6.4  
AE013599-1349|AAF58616.2|  855|Drosophila melanogaster CG8271-PA...    27   6.4  

>BT023165-1|AAY55581.1|  580|Drosophila melanogaster IP03406p
           protein.
          Length = 580

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -1

Query: 106 NKPGKHLYFAYVIPQPV 56
           NKPGKHL   YVIP PV
Sbjct: 180 NKPGKHL--KYVIPDPV 194


>AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH12174
            protein.
          Length = 1189

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
 Frame = +2

Query: 2    DSTVLRCCLWMI---RCFDAFNRLRYYVCKIEMLPWLIFDATFSLQ--SGKHSCENNSGF 166
            D+  L  C W     + F + N L+Y+VC +     L  DA    Q  SG + C+N +  
Sbjct: 975  DANWLYICDWRNCPRKKFKSLNELQYHVCSVHCPDHLDSDADIYCQWGSGPNFCDNRARK 1034

Query: 167  IFHLISP-VRYALTHSNL 217
             + L++  +   LT  NL
Sbjct: 1035 RYSLMTHLIDRHLTTENL 1052


>AE014297-3741|AAF56421.2|  807|Drosophila melanogaster CG13664-PA
           protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -1

Query: 106 NKPGKHLYFAYVIPQPV 56
           NKPGKHL   YVIP PV
Sbjct: 408 NKPGKHL--KYVIPDPV 422


>AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA
            protein.
          Length = 1688

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
 Frame = +2

Query: 2    DSTVLRCCLWMI---RCFDAFNRLRYYVCKIEMLPWLIFDATFSLQ--SGKHSCENNSGF 166
            D+  L  C W     + F + N L+Y+VC +     L  DA    Q  SG + C+N +  
Sbjct: 1474 DANWLYICDWRNCPRKKFKSLNELQYHVCSVHCPDHLDSDADIYCQWGSGPNFCDNRARK 1533

Query: 167  IFHLISP-VRYALTHSNL 217
             + L++  +   LT  NL
Sbjct: 1534 RYSLMTHLIDRHLTTENL 1551


>AE014134-1855|AAF52927.2|  287|Drosophila melanogaster CG5056-PA
           protein.
          Length = 287

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 177 RWKIKPELFSHECFPDCKEK 118
           RWK +P   S  C  DCK++
Sbjct: 58  RWKCRPRRRSESCLQDCKQE 77


>BT016038-1|AAV36923.1|  855|Drosophila melanogaster RE01051p
           protein.
          Length = 855

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 370 IVLHLLECPYLLFYLPHRIIVLILN 296
           + L  + CPY+L+YLP  +I +  N
Sbjct: 665 VTLMSVGCPYMLYYLPAHVISIGYN 689


>AE013599-1349|AAF58616.2|  855|Drosophila melanogaster CG8271-PA
           protein.
          Length = 855

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 370 IVLHLLECPYLLFYLPHRIIVLILN 296
           + L  + CPY+L+YLP  +I +  N
Sbjct: 665 VTLMSVGCPYMLYYLPAHVISIGYN 689


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,452,215
Number of Sequences: 53049
Number of extensions: 275660
Number of successful extensions: 592
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)