Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C09f
(315 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical pr... 59 6e-10
AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical ... 41 2e-04
U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical pr... 32 0.100
U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical pr... 32 0.100
Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical pr... 30 0.40
AF101319-4|AAC69352.1| 463|Caenorhabditis elegans Hypothetical ... 27 3.8
Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical pr... 26 6.6
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 25 8.7
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 25 8.7
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 25 8.7
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 25 8.7
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 25 8.7
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 25 8.7
>Z27079-6|CAA81594.1| 288|Caenorhabditis elegans Hypothetical
protein T05G5.6 protein.
Length = 288
Score = 59.3 bits (137), Expect = 6e-10
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +1
Query: 136 VLNKCKVVSATSQASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFXEL 315
++ K+ + +Q + +S+ + E IK+E VG K+NV LI+LNRPKALNALC L EL
Sbjct: 8 LVRNAKLCANVNQMQVAAFSSKAPEMIKIEKVGEKQNVALIKLNRPKALNALCAQLMTEL 67
>AL132876-4|CAC48118.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8A.4 protein.
Length = 256
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +1
Query: 214 IKVEVVGSKKNVGLIQLNRPKALNALCKPLFXEL 315
I + G+ +NV LI LNRP ALNALC+ L EL
Sbjct: 2 ITLSRTGAAENVALITLNRPSALNALCRELMLEL 35
>U00050-8|AAM22062.1| 363|Caenorhabditis elegans Hypothetical
protein F09F7.4b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.100
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 193 STASYENIKVEVVGSKKNVGLIQLNRPKALNAL 291
S A+ I V+ GSKK ++ LNRPKALNAL
Sbjct: 6 SAAAKSEILVDTHGSKK---VVTLNRPKALNAL 35
>U00050-7|AAA50696.1| 386|Caenorhabditis elegans Hypothetical
protein F09F7.4a protein.
Length = 386
Score = 31.9 bits (69), Expect = 0.100
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 193 STASYENIKVEVVGSKKNVGLIQLNRPKALNAL 291
S A+ I V+ GSKK ++ LNRPKALNAL
Sbjct: 29 SAAAKSEILVDTHGSKK---VVTLNRPKALNAL 58
>Z46240-4|CAA86314.1| 255|Caenorhabditis elegans Hypothetical
protein B0272.4 protein.
Length = 255
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 238 KKNVGLIQLNRPKALNALCKPLFXEL 315
K NV + LNRPK NAL + +F +L
Sbjct: 11 KNNVLWVTLNRPKKFNALTRQMFLDL 36
>AF101319-4|AAC69352.1| 463|Caenorhabditis elegans Hypothetical
protein K08D9.2 protein.
Length = 463
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 173 WLVADTTLHLFSTFFPSKARVTVATEAI 90
W +D+ LH T P+ A++ +AT ++
Sbjct: 286 WTHSDSLLHFLRTLPPTIAKINIATSSV 313
>Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical
protein R08H2.9 protein.
Length = 433
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 115 RALLGKNVLNKCKVVSATSQASIKFYSTASYENIKVEVVGSKKN 246
RA++G+N+ KC + I F ST ++ V ++ KKN
Sbjct: 98 RAIVGENIKRKCNL-----NCDILFGSTNLFQFNSVIIIAEKKN 136
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 28 CLCPYH*YCINP 63
C+C +H YCI+P
Sbjct: 335 CVCSFHAYCIDP 346
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 100 VATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENI 216
+A V L K + +C V + SQA FY A E I
Sbjct: 203 LAIVVGHLERKEISERCAVWAEPSQAEASFYEFAETEKI 241
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 100 VATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENI 216
+A V L K + +C V + SQA FY A E I
Sbjct: 204 LAIVVGHLERKEISERCAVWAEPSQAEASFYEFAETEKI 242
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 25.4 bits (53), Expect = 8.7
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 28 CLCPYH*YCINP 63
C+C +H YCI+P
Sbjct: 335 CVCSFHAYCIDP 346
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 100 VATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENI 216
+A V L K + +C V + SQA FY A E I
Sbjct: 204 LAIVVGHLERKEISERCAVWAEPSQAEASFYEFAETEKI 242
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 100 VATVTRALLGKNVLNKCKVVSATSQASIKFYSTASYENI 216
+A V L K + +C V + SQA FY A E I
Sbjct: 204 LAIVVGHLERKEISERCAVWAEPSQAEASFYEFAETEKI 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,146,068
Number of Sequences: 27780
Number of extensions: 131737
Number of successful extensions: 374
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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