Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C08f
(346 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00968-1|AAC50051.2| 1147|Homo sapiens SREBP-1 protein. 58 1e-08
BC063281-1|AAH63281.1| 1177|Homo sapiens sterol regulatory eleme... 58 1e-08
BC057388-1|AAH57388.1| 1147|Homo sapiens sterol regulatory eleme... 58 1e-08
BC026962-1|AAH26962.1| 750|Homo sapiens Unknown (protein for IM... 58 1e-08
BC023621-1|AAH23621.1| 686|Homo sapiens SREBF1 protein protein. 58 1e-08
AB209609-1|BAD92846.1| 697|Homo sapiens sterol regulatory eleme... 58 1e-08
U02031-1|AAA50746.1| 1141|Homo sapiens sterol regulatory element... 51 1e-06
Z99716-1|CAI41688.1| 1141|Homo sapiens sterol regulatory element... 50 3e-06
CT841522-1|CAJ86452.1| 1141|Homo sapiens SREBF2 protein. 50 3e-06
BC056158-1|AAH56158.1| 1141|Homo sapiens sterol regulatory eleme... 50 3e-06
BC051799-1|AAH51799.1| 1193|Homo sapiens SREBF2 protein protein. 50 3e-06
AL021453-2|CAI22917.1| 1141|Homo sapiens sterol regulatory eleme... 50 3e-06
BC051385-1|AAH51385.1| 681|Homo sapiens SREBF2 protein protein. 41 0.001
X63613-1|CAA45158.1| 381|Homo sapiens pentaxin protein. 29 5.2
X63053-1|CAA44778.1| 381|Homo sapiens PTX3 protein. 29 5.2
M31166-1|AAA61234.1| 381|Homo sapiens tumor necrosis factor pro... 29 5.2
DQ207368-1|ABA64467.1| 381|Homo sapiens pentaxin-related protei... 29 5.2
BC039733-1|AAH39733.1| 381|Homo sapiens pentraxin-related gene,... 29 5.2
>U00968-1|AAC50051.2| 1147|Homo sapiens SREBP-1 protein.
Length = 1147
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
++L+N +++ LV L VYG+ V + S A F++H++ A +L +GD +L A
Sbjct: 549 VWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLA 608
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L A GR + A +L ++R LQRL G +LA RAG L +D
Sbjct: 609 LRALGRPLPTSHLDLA--CSLLWNLIRHLLQRLWVGRWLAGRAGGLQQD 655
>BC063281-1|AAH63281.1| 1177|Homo sapiens sterol regulatory element
binding transcription factor 1 protein.
Length = 1177
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
++L+N +++ LV L VYG+ V + S A F++H++ A +L +GD +L A
Sbjct: 579 VWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLA 638
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L A GR + A +L ++R LQRL G +LA RAG L +D
Sbjct: 639 LRALGRPLPTSHLDLA--CSLLWNLIRHLLQRLWVGRWLAGRAGGLQQD 685
>BC057388-1|AAH57388.1| 1147|Homo sapiens sterol regulatory element
binding transcription factor 1 protein.
Length = 1147
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
++L+N +++ LV L VYG+ V + S A F++H++ A +L +GD +L A
Sbjct: 549 VWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLA 608
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L A GR + A +L ++R LQRL G +LA RAG L +D
Sbjct: 609 LRALGRPLPTSHLDLA--CSLLWNLIRHLLQRLWVGRWLAGRAGGLQQD 655
>BC026962-1|AAH26962.1| 750|Homo sapiens Unknown (protein for
IMAGE:5103173) protein.
Length = 750
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
++L+N +++ LV L VYG+ V + S A F++H++ A +L +GD +L A
Sbjct: 152 VWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLA 211
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L A GR + A +L ++R LQRL G +LA RAG L +D
Sbjct: 212 LRALGRPLPTSHLDLA--CSLLWNLIRHLLQRLWVGRWLAGRAGGLQQD 258
>BC023621-1|AAH23621.1| 686|Homo sapiens SREBF1 protein protein.
Length = 686
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
++L+N +++ LV L VYG+ V + S A F++H++ A +L +GD +L A
Sbjct: 88 VWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLA 147
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L A GR + A +L ++R LQRL G +LA RAG L +D
Sbjct: 148 LRALGRPLPTSHLDLA--CSLLWNLIRHLLQRLWVGRWLAGRAGGLQQD 194
>AB209609-1|BAD92846.1| 697|Homo sapiens sterol regulatory element
binding transcription factor 1 isoform a variant
protein.
Length = 697
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/109 (34%), Positives = 59/109 (54%)
Frame = +3
Query: 18 IYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLELHRA 197
++L+N +++ LV L VYG+ V + S A F++H++ A +L +GD +L A
Sbjct: 99 VWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLA 158
Query: 198 LEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARRAGDLWRD 344
L A GR + A +L ++R LQRL G +LA RAG L +D
Sbjct: 159 LRALGRPLPTSHLDLA--CSLLWNLIRHLLQRLWVGRWLAGRAGGLQQD 205
>U02031-1|AAA50746.1| 1141|Homo sapiens sterol regulatory element
binding protein-2 protein.
Length = 1141
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T ++LVN VI+ VKLLV+G+ V + S+ + F++H++ A +L +GD L
Sbjct: 538 TLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAANL 597
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARR 323
L GR++ A +L+ V+R LQ+L +L ++
Sbjct: 598 QTCLAVLGRALPTSRLDLA--CSLSWNVIRYSLQKLRLVRWLLKK 640
>Z99716-1|CAI41688.1| 1141|Homo sapiens sterol regulatory element
binding transcription factor 2 protein.
Length = 1141
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T ++LVN VI+ VKLLV+G+ V + S+ + F++H++ A +L +GD L
Sbjct: 538 TLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAGNL 597
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARR 323
L GR++ A +L+ V+R LQ+L +L ++
Sbjct: 598 QTCLAVLGRALPTSRLDLA--CSLSWNVIRYSLQKLRLVRWLLKK 640
>CT841522-1|CAJ86452.1| 1141|Homo sapiens SREBF2 protein.
Length = 1141
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T ++LVN VI+ VKLLV+G+ V + S+ + F++H++ A +L +GD L
Sbjct: 538 TLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAGNL 597
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARR 323
L GR++ A +L+ V+R LQ+L +L ++
Sbjct: 598 QTCLAVLGRALPTSRLDLA--CSLSWNVIRYSLQKLRLVRWLLKK 640
>BC056158-1|AAH56158.1| 1141|Homo sapiens sterol regulatory element
binding transcription factor 2 protein.
Length = 1141
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T ++LVN VI+ VKLLV+G+ V + S+ + F++H++ A +L +GD L
Sbjct: 538 TLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAGNL 597
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARR 323
L GR++ A +L+ V+R LQ+L +L ++
Sbjct: 598 QTCLAVLGRALPTSRLDLA--CSLSWNVIRYSLQKLRLVRWLLKK 640
>BC051799-1|AAH51799.1| 1193|Homo sapiens SREBF2 protein protein.
Length = 1193
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T ++LVN VI+ VKLLV+G+ V + S+ + F++H++ A +L +GD L
Sbjct: 590 TLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAGNL 649
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARR 323
L GR++ A +L+ V+R LQ+L +L ++
Sbjct: 650 QTCLAVLGRALPTSRLDLA--CSLSWNVIRYSLQKLRLVRWLLKK 692
>AL021453-2|CAI22917.1| 1141|Homo sapiens sterol regulatory element
binding transcription factor 2 protein.
Length = 1141
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKGDLNNTRLEL 188
T ++LVN VI+ VKLLV+G+ V + S+ + F++H++ A +L +GD L
Sbjct: 538 TLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAGNL 597
Query: 189 HRALEACGRSVQAGGPGQAKYTALTAAVLRQXLQRLPFGGFLARR 323
L GR++ A +L+ V+R LQ+L +L ++
Sbjct: 598 QTCLAVLGRALPTSRLDLA--CSLSWNVIRYSLQKLRLVRWLLKK 640
>BC051385-1|AAH51385.1| 681|Homo sapiens SREBF2 protein protein.
Length = 681
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +3
Query: 9 TFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLAGNNLKKG 161
T ++LVN VI+ VKLLV+G+ V + S+ + F++H++ A +L +G
Sbjct: 535 TLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARG 585
>X63613-1|CAA45158.1| 381|Homo sapiens pentaxin protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 138 AGNNLKKGDLNNTRLELHRALEACGRSVQAGGPGQAKYTALTAAVLR 278
A +++ +G+L R EL R E+ R G P +A+ T+ +L+
Sbjct: 76 ATDDVLRGELQRLREELGRLAESLARPCAPGAPAEARLTSALDELLQ 122
>X63053-1|CAA44778.1| 381|Homo sapiens PTX3 protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 138 AGNNLKKGDLNNTRLELHRALEACGRSVQAGGPGQAKYTALTAAVLR 278
A +++ +G+L R EL R E+ R G P +A+ T+ +L+
Sbjct: 76 ATDDVLRGELQRLREELGRLAESLARPCAPGAPAEARLTSALDELLQ 122
>M31166-1|AAA61234.1| 381|Homo sapiens tumor necrosis factor
protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 138 AGNNLKKGDLNNTRLELHRALEACGRSVQAGGPGQAKYTALTAAVLR 278
A +++ +G+L R EL R E+ R G P +A+ T+ +L+
Sbjct: 76 ATDDVLRGELQRLREELGRLAESLARPCAPGAPAEARLTSALDELLQ 122
>DQ207368-1|ABA64467.1| 381|Homo sapiens pentaxin-related protein
PTX3 protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 138 AGNNLKKGDLNNTRLELHRALEACGRSVQAGGPGQAKYTALTAAVLR 278
A +++ +G+L R EL R E+ R G P +A+ T+ +L+
Sbjct: 76 ATDDVLRGELQRLREELGRLAESLARPCAPGAPAEARLTSALDELLQ 122
>BC039733-1|AAH39733.1| 381|Homo sapiens pentraxin-related gene,
rapidly induced by IL-1 beta protein.
Length = 381
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +3
Query: 138 AGNNLKKGDLNNTRLELHRALEACGRSVQAGGPGQAKYTALTAAVLR 278
A +++ +G+L R EL R E+ R G P +A+ T+ +L+
Sbjct: 76 ATDDVLRGELQRLREELGRLAESLARPCAPGAPAEARLTSALDELLQ 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,855,628
Number of Sequences: 237096
Number of extensions: 1213325
Number of successful extensions: 6729
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6723
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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