Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C07f
         (344 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   0.67 
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    23   0.88 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   1.5  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   4.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   8.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   8.2  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 0.67
 Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -1

Query: 98  CYCIYSQSL--DRIYSTKLLYF*IKLTFLL 15
           CYC Y+  +  D +Y+T  L+F + ++ LL
Sbjct: 273 CYCYYNSKMTKDGVYNT--LFFIVYVSLLL 300


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 0.88
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
 Frame = -3

Query: 270 VLQRHIRDLHI--VATPSAEKLD 208
           +LQ HI DLH   V  P  EK D
Sbjct: 86  ILQLHIYDLHYNPVIYPEPEKFD 108


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
 Frame = -3

Query: 297 CVLLFNGNVVLQRHIR-------DLHIVATPSAEKLDFRNVGGLW*RHGFHNHAACLGYV 139
           C   F   +VLQ+HIR       DL      +AE  DF + GG    H   N     G+ 
Sbjct: 200 CHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGGFPSIHNSINPFLGQGFA 259

Query: 138 VIPVL--LGH 115
           V P L  LGH
Sbjct: 260 V-PGLSPLGH 268


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -1

Query: 284 LTEM*SCRDISETCTS*QLHLPKSLISGMSAACGK 180
           LT    C      CTS    L K+L   +S+ C K
Sbjct: 42  LTNYIKCLMDEGPCTSEGRELKKTLPDALSSGCTK 76


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -3

Query: 177 HGFHNHAAC 151
           HGFHN   C
Sbjct: 493 HGFHNPFTC 501


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 303 IFCVLLFNGNVVLQRHIR 250
           +FC   F  +  LQRH+R
Sbjct: 350 LFCGKRFTRSDELQRHLR 367


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,504
Number of Sequences: 336
Number of extensions: 1466
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)