Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C07f
         (344 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          24   0.58 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   1.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   2.3  
M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    21   5.4  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   5.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   7.2  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   7.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   9.5  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = +2

Query: 89  YNNIFRYQSW--PRRTGMTT 142
           YNNI R +SW  PR +  TT
Sbjct: 38  YNNIKRKRSWSRPRESAQTT 57


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +2

Query: 89  YNNIFRYQSW--PRRTGMTT 142
           YNNI R +SW  PR    TT
Sbjct: 159 YNNIKRKRSWSRPREPAQTT 178


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 262 ETYQRLAHRSNSICRKA*FQECRRLVVKTWFP 167
           + Y+RL H  N I ++  F    RL   T+ P
Sbjct: 240 QVYRRLVHAVNEIEKRLLFSHNDRLGFLTFCP 271


>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +3

Query: 180 FTTSRRHS*NQAFRQMELLRCASL*YVSAGLHFR*REVR 296
           FTT +  S  + FR+ + L  A     S+ LH    +V+
Sbjct: 16  FTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQVK 54


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 114 DWYLKMLLYLFTV 76
           DW+ K +L +FT+
Sbjct: 58  DWFRKNMLLVFTI 70


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 85  IHSHLTEFIVPSCYTFKLNSL 23
           +HS  TE  +P  YTF +  L
Sbjct: 925 VHSFPTETGLPFVYTFNVIKL 945


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -2

Query: 103 KNVIVFIHSHLTEFIVPSCYTFKLNSLF 20
           K+ +VF+ +H T+   P   T+K +  +
Sbjct: 299 KDSLVFVDNHDTQRDNPQILTYKYSKRY 326


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 74  VTVNKYNNIFRYQSWPR 124
           V  N Y N   YQ +PR
Sbjct: 22  VDANWYKNALVYQIYPR 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,599
Number of Sequences: 438
Number of extensions: 1517
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)