Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C06f
         (429 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   3.5  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   4.6  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   6.1  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 348 FSNYVKPHLFGTIHHFLRAKLH 283
           +S+YV P L+  +H+ +   +H
Sbjct: 58  YSSYVLPKLYAKLHYCVSCAIH 79


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 62  IQFEKISWHCAKFTN 106
           I F + SWHC  F+N
Sbjct: 621 IVFLEPSWHCGPFSN 635


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 15  NELQKYVVTSTFFLKE-FNLRK-FLGIVQNLQTKCYE 119
           +++Q  V+T+T FLKE +  R+ FL   Q   T CY+
Sbjct: 124 SQVQPSVITATGFLKECYCCRESFLRERQLQLTHCYD 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,924
Number of Sequences: 2352
Number of extensions: 6026
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)