Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C05f
(403 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944 89 9e-19
02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254 89 9e-19
02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907 89 9e-19
03_02_0031 + 5134889-5135021,5135109-5135179,5135267-5135428,513... 37 0.007
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 36 0.009
09_02_0565 + 10710770-10711003,10711368-10711527,10712277-107124... 29 1.8
04_04_0802 - 28155281-28155725,28155750-28156081,28156164-281562... 27 4.2
03_01_0013 - 105281-105552,105762-105838,105839-106524,106655-10... 27 4.2
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 27 4.2
12_01_0282 - 2088302-2089081 27 7.3
11_01_0273 - 2048527-2049297 27 7.3
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 27 7.3
07_03_0054 + 12848425-12848593,12850106-12850278 27 7.3
05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,314... 27 7.3
08_02_0946 + 22880399-22880600,22881588-22881650,22881786-228817... 26 9.7
08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,130... 26 9.7
01_05_0572 + 23356737-23357705,23357811-23357957,23358048-23358443 26 9.7
01_03_0025 + 11739930-11740493,11740820-11741020,11741143-117412... 26 9.7
>06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944
Length = 51
Score = 89.4 bits (212), Expect = 9e-19
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 59
KTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 5 KTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254
Length = 51
Score = 89.4 bits (212), Expect = 9e-19
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 59
KTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 5 KTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907
Length = 51
Score = 89.4 bits (212), Expect = 9e-19
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 59
KTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 5 KTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 49
>03_02_0031 +
5134889-5135021,5135109-5135179,5135267-5135428,
5135786-5135891,5136385-5136429,5136850-5136946,
5137027-5137210,5137304-5137483,5137567-5137770
Length = 393
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 301 VLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
+LD++LFR +K G+P+ IR++Q+ R V L D
Sbjct: 1 MLDINLFRTEKGGDPELIRKSQRNRSASVELVD 33
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 36.3 bits (80), Expect = 0.009
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 301 VLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
+LD++LFR +K G+P+ IR +Q+ R V L D
Sbjct: 1 MLDINLFRTEKGGDPELIRRSQRNRSASVELVD 33
>09_02_0565 +
10710770-10711003,10711368-10711527,10712277-10712477,
10712564-10712628,10712740-10712767,10712847-10712923,
10713023-10713109,10713572-10713622,10713857-10713937,
10714125-10714346,10714424-10714517,10714608-10714748,
10716383-10716444,10716519-10717106
Length = 696
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKR 83
K IIKR+ AK+L+Q P++ + TG +AKR
Sbjct: 214 KETIIKREAAKRLEQTSEEPEYAPLPTGPGAVADAKR 250
>04_04_0802 -
28155281-28155725,28155750-28156081,28156164-28156266,
28156347-28156528,28156617-28156800,28156872-28156960,
28157634-28157710,28157837-28157927,28158230-28158430
Length = 567
Score = 27.5 bits (58), Expect = 4.2
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = -1
Query: 241 LSNTSSLVSLVPIRHGKT-----FIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRH 77
LSN ++ VP R+GKT I RK K +NR +P ++ +++ + +
Sbjct: 168 LSNDVKIIRQVPDRNGKTPYPYKMRIPRKCTAKCYENRVLPALLKKHVVQLTKFDYRVSN 227
Query: 76 WRRTKLKL*AC 44
T L+ C
Sbjct: 228 RLETNLQKLRC 238
>03_01_0013 -
105281-105552,105762-105838,105839-106524,106655-106738,
106914-107114,107202-107309,107766-107855,108505-108551,
109096-109276,110010-110135,110220-110386,110877-111072
Length = 744
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 287 ITSTWSST*TYFVPIKTVIQIKFEKIRRRDLKML 388
+T W S F P VIQ +K+ RRDL+ +
Sbjct: 73 VTDGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRM 106
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 27.5 bits (58), Expect = 4.2
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -2
Query: 402 CIXKGNIFKSLLLIFSNFIWITVFIGTK*V*VEDHVDVINLTQINYICRNIL*NYQTRRL 223
C+ G ++ L+F F W+ +F+ T + + + YI +N + Q +R
Sbjct: 288 CVISGQYSSNMTLLFGLFSWLGIFLATAGLVM---FYKCSRKDPGYIDKNTR-DAQNQRD 343
Query: 222 SSPSCRFGTGRRLLLSANW 166
P + G LL+ NW
Sbjct: 344 DEPLLKRGLDNPELLAGNW 362
>12_01_0282 - 2088302-2089081
Length = 259
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 62 LCPS-PVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQFALNNKRLPVPNR 208
LCP P TPL + V HP+ LR + +L+N RL +P R
Sbjct: 37 LCPYLPATPLPTSTTVVILHHPHALRRNPLSTLPLLARSLSNLRL-IPGR 85
>11_01_0273 - 2048527-2049297
Length = 256
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 62 LCPS-PVTPLSVISNSVSCAHPYPLRNGSVLFQLFGQFALNNKRLPVPNR 208
LCP P TPL + V HP+ LR + +L+N RL +P R
Sbjct: 37 LCPYLPATPLPTSTTVVVLHHPHALRRNPLSTLPLLARSLSNLRL-IPGR 85
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 306 EDHVDVINLTQ-INYICRNIL*NYQTRRLSSPSCRFGTGRRLL 181
E HV+ + Q + Y N+L TR+ S CRF GR +L
Sbjct: 549 ESHVERMGSIQDVAYEILNVLEFNSTRKRQSVVCRFPNGRLVL 591
>07_03_0054 + 12848425-12848593,12850106-12850278
Length = 113
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 32 FNTFTSLQLELCPSPVTPLSVISNSVSCA 118
F T+ S+ +L PSP + L V S+SC+
Sbjct: 8 FTTYVSIVPDLRPSPRSHLCVNHGSISCS 36
>05_01_0398 +
3142934-3143110,3143697-3143930,3144180-3144353,
3144450-3144554,3145274-3145351,3146019-3146100,
3146519-3146681,3147100-3147435,3147511-3147641,
3147687-3147729,3147826-3148444,3148523-3148588,
3149103-3149265,3149557-3149635,3150232-3150431,
3150972-3151144,3151466-3151559,3152353-3152444,
3153146-3153436
Length = 1099
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 66 VLLQ*RLLALYRIVFPVRILTH*GMGLFCFSFLANLRLIINVF 194
V LQ RL + IL+H +GLFC F +R + VF
Sbjct: 770 VSLQARLARFQHRLKEQEILSHAWLGLFCQFFHCMMRRVTTVF 812
>08_02_0946 +
22880399-22880600,22881588-22881650,22881786-22881790,
22882143-22882253,22882339-22882443,22882529-22882609,
22883236-22883247,22883680-22883733,22884476-22884586,
22884789-22884935
Length = 296
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 17 FYYITFNTFTSLQLELCPSPVTPLSVISNSVSCAHPYPLRNGSVL 151
FY T T Q LCP P+T +I N C YP + VL
Sbjct: 208 FYGQLVATITH-QSHLCPLPLTVQPIIWNYDHCLRLYPTPHTIVL 251
>08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,
1307360-1308768
Length = 1303
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +2
Query: 92 VISNSVSCAHPYP-----LRNGSVLFQLFGQFALNNKRLPVP 202
VI + CAHP P +RN + Q GQ + ++PVP
Sbjct: 1135 VIVIGLWCAHPDPNARPSIRNAMAMLQSGGQLPVLPAKMPVP 1176
>01_05_0572 + 23356737-23357705,23357811-23357957,23358048-23358443
Length = 503
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -3
Query: 242 IIKHVVSRLPRADSAR 195
+++H+VSRLP D+AR
Sbjct: 50 LLRHIVSRLPTKDAAR 65
>01_03_0025 +
11739930-11740493,11740820-11741020,11741143-11741235,
11741355-11742125
Length = 542
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 127 VRMRTGNTIRYNAKRRHWRRTKLKL 53
++ R +R + RRHWRR L L
Sbjct: 75 IKARNSPLLRVSPFRRHWRRLSLSL 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,716,120
Number of Sequences: 37544
Number of extensions: 178886
Number of successful extensions: 416
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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