Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C05f
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071712-1|AAL49334.1|   51|Drosophila melanogaster RH27094p pro...    94   7e-20
AE013599-3798|AAF47154.1|   51|Drosophila melanogaster CG3997-PA...    94   7e-20
AF012422-1|AAB65802.1|   51|Drosophila melanogaster ribosomal pr...    91   4e-19
BT016042-1|AAV36927.1|  501|Drosophila melanogaster LP20978p pro...    63   1e-10
AE014134-545|AAF51155.1|  501|Drosophila melanogaster CG17259-PA...    63   1e-10

>AY071712-1|AAL49334.1|   51|Drosophila melanogaster RH27094p
           protein.
          Length = 51

 Score = 93.9 bits (223), Expect = 7e-20
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -1

Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
           K+F IK+KLAKKLKQNR +PQWVR+RTGNTIRYNAKRRHWRRTKLKL
Sbjct: 5   KSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51


>AE013599-3798|AAF47154.1|   51|Drosophila melanogaster CG3997-PA
           protein.
          Length = 51

 Score = 93.9 bits (223), Expect = 7e-20
 Identities = 41/47 (87%), Positives = 45/47 (95%)
 Frame = -1

Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
           K+F IK+KLAKKLKQNR +PQWVR+RTGNTIRYNAKRRHWRRTKLKL
Sbjct: 5   KSFRIKQKLAKKLKQNRSVPQWVRLRTGNTIRYNAKRRHWRRTKLKL 51


>AF012422-1|AAB65802.1|   51|Drosophila melanogaster ribosomal
           protein 46 protein.
          Length = 51

 Score = 91.5 bits (217), Expect = 4e-19
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -1

Query: 193 KTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 53
           K+F IK+KLAKKLKQNR +PQWVR+ TGNTIRYNAKRRHWRRTKLKL
Sbjct: 5   KSFRIKQKLAKKLKQNRSVPQWVRLATGNTIRYNAKRRHWRRTKLKL 51


>BT016042-1|AAV36927.1|  501|Drosophila melanogaster LP20978p
           protein.
          Length = 501

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +1

Query: 298 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
           MVLDLDLFR+DK GNPD +RENQKKRFKDVAL +
Sbjct: 1   MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVE 34


>AE014134-545|AAF51155.1|  501|Drosophila melanogaster CG17259-PA
           protein.
          Length = 501

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +1

Query: 298 MVLDLDLFRADKDGNPDKIRENQKKRFKDVALXD 399
           MVLDLDLFR+DK GNPD +RENQKKRFKDVAL +
Sbjct: 1   MVLDLDLFRSDKGGNPDLVRENQKKRFKDVALVE 34


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,502,854
Number of Sequences: 53049
Number of extensions: 310848
Number of successful extensions: 705
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)