Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301C04f
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p pro...    39   0.002
AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-P...    39   0.002
AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-P...    39   0.002
AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-P...    39   0.002
AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-P...    39   0.002
AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein...    27   8.6  
AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA...    27   8.6  

>BT010282-1|AAQ23600.1| 1001|Drosophila melanogaster RE04457p
           protein.
          Length = 1001

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 165 QVDISFNMSSGVKSAELIKHFK 100
           +VDISFNM SGV+SAELIK FK
Sbjct: 381 KVDISFNMQSGVQSAELIKKFK 402


>AE014298-1203|AAS65290.1| 1001|Drosophila melanogaster CG11265-PE,
           isoform E protein.
          Length = 1001

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 165 QVDISFNMSSGVKSAELIKHFK 100
           +VDISFNM SGV+SAELIK FK
Sbjct: 381 KVDISFNMQSGVQSAELIKKFK 402


>AE014298-1202|AAS65289.1| 1029|Drosophila melanogaster CG11265-PC,
           isoform C protein.
          Length = 1029

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 165 QVDISFNMSSGVKSAELIKHFK 100
           +VDISFNM SGV+SAELIK FK
Sbjct: 381 KVDISFNMQSGVQSAELIKKFK 402


>AE014298-1201|AAS65288.1| 1029|Drosophila melanogaster CG11265-PB,
           isoform B protein.
          Length = 1029

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 165 QVDISFNMSSGVKSAELIKHFK 100
           +VDISFNM SGV+SAELIK FK
Sbjct: 381 KVDISFNMQSGVQSAELIKKFK 402


>AE014298-1200|AAF46390.2| 1029|Drosophila melanogaster CG11265-PA,
           isoform A protein.
          Length = 1029

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 165 QVDISFNMSSGVKSAELIKHFK 100
           +VDISFNM SGV+SAELIK FK
Sbjct: 381 KVDISFNMQSGVQSAELIKKFK 402


>AJ556818-1|CAD89223.1| 2162|Drosophila melanogaster SMG1 protein
           protein.
          Length = 2162

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 219 LSTACAYVLWSIMSYFAAQVDISFNM 142
           L T CA VL  +  +F+ Q+D S+ +
Sbjct: 311 LKTHCAQVLEQLTPFFSKQIDFSYGL 336


>AE014298-963|AAF46207.2| 3218|Drosophila melanogaster CG32743-PA
           protein.
          Length = 3218

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 219 LSTACAYVLWSIMSYFAAQVDISFNM 142
           L T CA VL  +  +F+ Q+D S+ +
Sbjct: 311 LKTHCAQVLEQLTPFFSKQIDFSYGL 336


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,074,643
Number of Sequences: 53049
Number of extensions: 300333
Number of successful extensions: 528
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)