Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C02f
(506 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0188 - 18883979-18884250,18885046-18885666,18885762-188858... 33 0.17
11_05_0052 + 18683077-18683385 31 0.70
09_01_0093 - 1360596-1360625,1363562-1364266 31 0.70
05_01_0120 - 828834-831143 31 0.70
08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150 30 0.93
03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298 30 0.93
03_05_0209 + 22014556-22015308 30 1.2
02_04_0530 + 23702714-23703787 30 1.2
07_03_1450 + 26620178-26620456,26622122-26622775 29 1.6
11_02_0037 - 7613632-7613727,7614452-7615507 29 2.1
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 29 2.1
01_03_0130 + 12853325-12853948,12854657-12854822,12854907-128551... 29 2.1
02_03_0064 + 14607975-14608925 29 2.8
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 29 2.8
11_06_0610 - 25449085-25453284 28 3.7
10_01_0295 - 3060398-3060415,3060487-3061011 28 3.7
07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323 28 3.7
09_04_0296 + 16461482-16461544,16462087-16463097 28 5.0
02_05_0084 - 25690346-25691206 28 5.0
08_02_0885 + 22268287-22268988 27 6.5
08_01_0910 + 8968896-8968932,8969111-8969181,8970417-8970740,897... 27 6.5
07_03_0624 + 20044406-20044756,20045168-20045221 27 6.5
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 27 6.5
05_07_0100 + 27679280-27680320 27 6.5
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 27 6.5
02_01_0035 - 220036-221419,222050-222801 27 6.5
07_01_0017 - 114497-114547,114700-114816,114917-114997,115312-11... 27 8.7
03_05_0928 + 28888405-28889121 27 8.7
03_03_0191 + 15302384-15302422,15302780-15303246,15303356-153035... 27 8.7
>05_04_0188 -
18883979-18884250,18885046-18885666,18885762-18885887,
18886007-18886265
Length = 425
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +3
Query: 384 QAPEHSHHQLHDASLPPPANRSSGEYRRSGP 476
QA H HH H A PP +RSS RRS P
Sbjct: 3 QASSHQHHYQHSAK--PPVSRSSSWIRRSPP 31
>11_05_0052 + 18683077-18683385
Length = 102
Score = 30.7 bits (66), Expect = 0.70
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 468 SGDIPPKTCSQAGGGMHRAAGDGSVRALAPVDSCGPDGTRYR--TRFP 331
+G P T + GGG +GDG VRA P +CG +R +RFP
Sbjct: 37 TGAADPTTVMRRGGG----SGDGEVRAHPPCTACGCLSHHHRGESRFP 80
>09_01_0093 - 1360596-1360625,1363562-1364266
Length = 244
Score = 30.7 bits (66), Expect = 0.70
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 477 RVLSGDIPPKTCSQAGGGMHRAAGD-GSVRALAPVDSCGPDGTRYRTRFPKCRSF 316
+V++ D + SQ G G +GD G V+ G DGT R P+C +F
Sbjct: 90 KVVAADEVGTSSSQGGKGTADGSGDKGDGLQDGVVEDLGEDGTEVREEPPRCTNF 144
>05_01_0120 - 828834-831143
Length = 769
Score = 30.7 bits (66), Expect = 0.70
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -3
Query: 468 SGDIPPKTCSQAGGGMHRAAGDGSVRALAPVDSCGPDGTRYRTRFP 331
S D PP + AG G AG G R + P P G + R+ P
Sbjct: 28 SRDTPPDAATPAGAGGGGGAGAGQARRIPPPPPLTPRGGKGRSCLP 73
>08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150
Length = 383
Score = 30.3 bits (65), Expect = 0.93
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 465 GDIPPKTCSQAGGGMHRAAGDGSVRALA 382
GD PP + GGGM ++A GS+ LA
Sbjct: 49 GDKPPTAAAGGGGGMRKSASMGSLAQLA 76
>03_05_0337 - 23272845-23273271,23273318-23273526,23275615-23276298
Length = 439
Score = 30.3 bits (65), Expect = 0.93
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 354 YRLARSCPQVQAPEHSHHQLHDASL-PPPANRSSGE 458
+ A + AP H HH H L PPPA SS +
Sbjct: 97 FTAAAAAAAAAAPPHHHHHHHGGPLTPPPATSSSSQ 132
>03_05_0209 + 22014556-22015308
Length = 250
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 220 ATLKLTASTWVNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNT 399
A + L + + V + VFS T+ L ++M + AL S+ A +RC +
Sbjct: 36 ALISLVSPSSVEYTVFSSTLPAPLRALGSFVMSKKALFVLSNAIFLFLAADYYRCFFSLS 95
Query: 400 PITS 411
P TS
Sbjct: 96 PSTS 99
>02_04_0530 + 23702714-23703787
Length = 357
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = +2
Query: 383 ASARTLPSPAARCIPPPACEQ------VFGGISPLRTLSXFMDMSP 502
A+AR P P A PP A EQ +FGG SPL +D SP
Sbjct: 166 AAARK-PPPLALSSPPAAAEQEDDLIDIFGGDSPLPAHEDLLDASP 210
>07_03_1450 + 26620178-26620456,26622122-26622775
Length = 310
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 375 PQVQAPEHSHHQLHDASLPPP 437
P P H HH L+ SLPPP
Sbjct: 133 PMPHQPYHHHHHLNPFSLPPP 153
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 288 PYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE-HSHHQLHDASLP 431
P+ + G + +G AY AR+ P P H HH H +P
Sbjct: 223 PHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPPPHGHHHHHQIIMP 271
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -1
Query: 386 LHLWTAAGQTVRVTELAFRSADLSIR*PEVIVRLVVTVSEKTAKFTQVEAVSFNVAHLKF 207
L+ T+ ++RVT RS D+ + P V L V++S+ +FTQ+ ++ + L+F
Sbjct: 749 LYQITSRFDSLRVTP---RSLDILAKGPPVCGDLAVSLSQAGPQFTQIMRCNYAIKALRF 805
Query: 206 RCA 198
A
Sbjct: 806 STA 808
>01_03_0130 +
12853325-12853948,12854657-12854822,12854907-12855118,
12855372-12855865,12856228-12856276,12856367-12856690
Length = 622
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 318 KICTSESEFGNAYRLARSCPQVQAPEHSHHQLHDASLPPPANRSSGEYRRSG 473
++ +S + A +A + P H HH LH LP A+ +S + ++SG
Sbjct: 17 RLLSSATAAAAAATVATATPLFPRCPHPHHHLHGRRLPFLASAASQQQQQSG 68
>02_03_0064 + 14607975-14608925
Length = 316
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 429 GGMHRAAGDGSVRALAPVDSCGPD--GTRYRTRFPKCR 322
G H + GDG AL P GPD G+ TR P+ R
Sbjct: 65 GNGHGSGGDGGDLALVPPSGGGPDGAGSESATRRPRGR 102
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 315 GKICTSESEFGNAYRLARSCPQVQAPEHSHHQLHDASLPPPANR 446
G +C F N++ ++ P++ PEHS + + PP R
Sbjct: 102 GGLCVPSRPFQNSHPISIQRPRLAHPEHSRNTFNPNKTTPPRLR 145
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 356 PSGPQLSTGASARTLPSPAARCIPPP 433
PS P+ S+ + ++LP PA +PPP
Sbjct: 1106 PSVPKASSPPTEKSLPPPATVSLPPP 1131
>10_01_0295 - 3060398-3060415,3060487-3061011
Length = 180
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 477 RVLSGDIPPKTCSQAGGGMHRAAGD-GSVRALAPVDSCGPDGTRYRTRFPKCRSFH 313
+V++ D + SQ G + A GD G V+ G DG + P+C +FH
Sbjct: 90 KVVAADEVGSSSSQGGKCVVDALGDKGDGLQDGVVEDLGEDGAEVQEEPPRCTNFH 145
>07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323
Length = 340
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +1
Query: 283 TSLTMTS-GYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPRL 438
T L MTS G ++ TVWPAA+ RP P T + P L
Sbjct: 80 TLLRMTSSGAAAVNFTFHFHNNCPETVWPAALSSAGRPPFPTTGFALPPGASL 132
>09_04_0296 + 16461482-16461544,16462087-16463097
Length = 357
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +3
Query: 273 DGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPEHSHHQLHDASLPPPANRSS 452
D ++ Y F + +ES +R S P Q PE A+ PP ++
Sbjct: 133 DASSSSYSSFTCSSASTTDTES---TTHRRRHSQPPPQQPEDVDAAAAAAAAAPPNSKPK 189
Query: 453 GEYRRSGPC 479
+ ++S PC
Sbjct: 190 KKKKKSRPC 198
>02_05_0084 - 25690346-25691206
Length = 286
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 333 ESEFGNAYRLARSCPQVQAPEHSHHQLHDASLPPPA 440
+ + G+ + S P V++P H++H AS P PA
Sbjct: 153 DDDGGHRHGSTGSSPPVRSPWHANHHAAAASTPAPA 188
>08_02_0885 + 22268287-22268988
Length = 233
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 289 LTMTSGYLMERSALRKASSVTR--TVWPAAVHRCKRPNTPITSCTM 420
LTMT +M KA+ + T PA RC+RP+ +C M
Sbjct: 31 LTMTHNCVMYLKNKEKAAGSVKGKTAIPATPRRCRRPDGSNPACKM 76
>08_01_0910 +
8968896-8968932,8969111-8969181,8970417-8970740,
8972878-8972934,8974578-8974641,8974749-8974810
Length = 204
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 367 AAVHRCKRPNTPITSCTMHPSP 432
A +HRC NTP+ C HP P
Sbjct: 4 AQLHRC---NTPVQGCYSHPMP 22
>07_03_0624 + 20044406-20044756,20045168-20045221
Length = 134
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 438 QAGGGMHRAAGDGSVRALAPVDSCGPDGTRYRTRFP 331
+AGGG R A DG R++A D G R R+ P
Sbjct: 27 EAGGGRRRGADDGGGRSVAEEDG----GQRRRSHLP 58
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 375 PQVQAPEHSHHQLHDASLPPP 437
P+VQ H HHQ A PPP
Sbjct: 73 PRVQHHHHHHHQQLPAPTPPP 93
>05_07_0100 + 27679280-27680320
Length = 346
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 362 GPQLSTGASARTLPSPAARCIPPP 433
GP LS AS R PSP+ +PPP
Sbjct: 130 GPTLSASASKRPSPSPSP--VPPP 151
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 375 PQVQAPEHSHHQLHDASLPPPANRSSGEYRRSGP 476
P A S H LH A L P ANR +G P
Sbjct: 221 PAATARPPSSHTLHQAHLMPNANRYNGPIHNEVP 254
>02_01_0035 - 220036-221419,222050-222801
Length = 711
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 393 EHSHHQLHDASLPPPANRSSGEYRRSGPCH 482
E HHQ H PPPA + + P H
Sbjct: 113 EQHHHQKHQQQPPPPARWAPQHHHHHHPHH 142
>07_01_0017 -
114497-114547,114700-114816,114917-114997,115312-115371,
116029-116238,116412-116720,116790-117080
Length = 372
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +3
Query: 117 IIEKDVFAFRQPSNRIGVGSLYGLMVFCTSKL 212
++ +F QP +R+ + L+G++V C S +
Sbjct: 227 LVPSHIFQVNQPMHRLPLHVLHGIIVLCVSAI 258
>03_05_0928 + 28888405-28889121
Length = 238
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = -3
Query: 459 IPPKTCSQAGGG----MHRAAGDGSVRALAPVDSCGPDGTRYRTR 337
+ P + GGG MH AA G+V VD G G R RTR
Sbjct: 79 VAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTR 123
>03_03_0191 +
15302384-15302422,15302780-15303246,15303356-15303563,
15303723-15303794,15304295-15304430,15304619-15304890,
15305197-15305345,15305818-15305947,15306244-15306258
Length = 495
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -1
Query: 227 NVAHLKFRCAEDHETVQ*ANTDSVAWLTESEHILFDDRESFGSSVQNSLSIFFQFDDSSA 48
+V +L RC + Q NTD ++W+ S+ ++ + ++S S + DD SA
Sbjct: 163 DVDNLFRRCDSTYGQQQLPNTDELSWIPSSD-AMYSSDVAMQPGFESSYSDYGILDDLSA 221
Query: 47 L-IFQNKSL 24
++KSL
Sbjct: 222 FNCTEDKSL 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,723,236
Number of Sequences: 37544
Number of extensions: 364195
Number of successful extensions: 1700
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1691
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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