Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C02f
(506 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 97 9e-21
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 97 9e-21
AY119586-1|AAM50240.1| 719|Drosophila melanogaster LD15094p pro... 54 1e-07
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P... 54 1e-07
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P... 54 1e-07
AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA... 40 0.001
AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin p... 40 0.001
BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p pro... 29 2.7
AY122109-1|AAM52621.1| 868|Drosophila melanogaster GH12365p pro... 29 2.7
AY047545-1|AAK77277.1| 224|Drosophila melanogaster GH05836p pro... 29 2.7
AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-P... 29 2.7
AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-P... 29 2.7
AE013599-1930|AAF58225.1| 224|Drosophila melanogaster CG10139-P... 29 2.7
AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA... 29 3.6
AE014298-2690|AAF48815.1| 432|Drosophila melanogaster CG5988-PA... 28 6.3
BT016059-1|AAV36944.1| 1691|Drosophila melanogaster LP14319p pro... 28 8.3
AY853687-1|AAX12107.1| 1706|Drosophila melanogaster cadherin 99C... 28 8.3
AY853686-1|AAX12106.1| 1706|Drosophila melanogaster cadherin 99C... 28 8.3
AY069587-1|AAL39732.2| 639|Drosophila melanogaster LD33388p pro... 28 8.3
AY058785-1|AAL14014.1| 1068|Drosophila melanogaster SD08329p pro... 28 8.3
AY058338-1|AAL13567.1| 689|Drosophila melanogaster GH11223p pro... 28 8.3
AE014297-4457|AAF56955.2| 1706|Drosophila melanogaster CG31009-P... 28 8.3
AE014296-1756|AAS65048.1| 107|Drosophila melanogaster CG33273-P... 28 8.3
AE014296-109|AAN11444.1| 1340|Drosophila melanogaster CG17090-PB... 28 8.3
AE014296-108|AAF47392.2| 1340|Drosophila melanogaster CG17090-PA... 28 8.3
AE014134-2986|AAF53716.2| 689|Drosophila melanogaster CG33120-P... 28 8.3
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 97.5 bits (232), Expect = 9e-21
Identities = 52/128 (40%), Positives = 76/128 (59%)
Frame = +3
Query: 3 QLQNGKPKALILEDKSGAIIELKENGQAILNGASKGFPIIEKDVFAFRQPSNRIGVGSLY 182
QL NGK K++ L D+ G+ E+ +N LNG +P + A+R+ I + S Y
Sbjct: 2828 QLTNGKLKSITLIDREGSYFEVADNLALKLNGNLVEYPQHLSGLHAWRR-FYTIHLYSEY 2886
Query: 183 GLMVFCTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRL 362
G+ + CTS L+VC+I NGFY K RGLLG+GN EPYDDF L +G + + + GN Y +
Sbjct: 2887 GVGIVCTSDLKVCHININGFYTSKTRGLLGNGNAEPYDDFLLIDGTLAENSAALGNDYGV 2946
Query: 363 ARSCPQVQ 386
+ C ++
Sbjct: 2947 GK-CTAIE 2953
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 97.5 bits (232), Expect = 9e-21
Identities = 52/128 (40%), Positives = 76/128 (59%)
Frame = +3
Query: 3 QLQNGKPKALILEDKSGAIIELKENGQAILNGASKGFPIIEKDVFAFRQPSNRIGVGSLY 182
QL NGK K++ L D+ G+ E+ +N LNG +P + A+R+ I + S Y
Sbjct: 2828 QLTNGKLKSITLIDREGSYFEVADNLALKLNGNLVEYPQHLSGLHAWRR-FYTIHLYSEY 2886
Query: 183 GLMVFCTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRL 362
G+ + CTS L+VC+I NGFY K RGLLG+GN EPYDDF L +G + + + GN Y +
Sbjct: 2887 GVGIVCTSDLKVCHININGFYTSKTRGLLGNGNAEPYDDFLLIDGTLAENSAALGNDYGV 2946
Query: 363 ARSCPQVQ 386
+ C ++
Sbjct: 2947 GK-CTAIE 2953
>AY119586-1|AAM50240.1| 719|Drosophila melanogaster LD15094p
protein.
Length = 719
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +3
Query: 48 SGAIIELK-ENGQAILNGASKGF-PIIEKDVFAFRQPSNRIGVGSLYGLMVFCTSKLEVC 221
+G +IE+ E +NG + P+ DV R + + + S + C + ++C
Sbjct: 204 NGQLIEIDLETDHISINGNPQPILPLKLGDVNIHRD-LDVLSITSDTEFSLHCNVQFDLC 262
Query: 222 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQ 380
+ E +G+Y G+ GLLG NNEPYD++ + +G I F +++ L + C Q
Sbjct: 263 WFEVSGWYFGRTAGLLGTLNNEPYDEYTMSSGVISNETQLFTDSWSL-KQCRQ 314
>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
isoform A protein.
Length = 4345
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +3
Query: 48 SGAIIELK-ENGQAILNGASKGF-PIIEKDVFAFRQPSNRIGVGSLYGLMVFCTSKLEVC 221
+G +IE+ E +NG + P+ DV R + + + S + C + ++C
Sbjct: 3830 NGQLIEIDLETDHISINGNPQPILPLKLGDVNIHRD-LDVLSITSDTEFSLHCNVQFDLC 3888
Query: 222 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQ 380
+ E +G+Y G+ GLLG NNEPYD++ + +G I F +++ L + C Q
Sbjct: 3889 WFEVSGWYFGRTAGLLGTLNNEPYDEYTMSSGVISNETQLFTDSWSL-KQCRQ 3940
>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
isoform B protein.
Length = 4374
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +3
Query: 48 SGAIIELK-ENGQAILNGASKGF-PIIEKDVFAFRQPSNRIGVGSLYGLMVFCTSKLEVC 221
+G +IE+ E +NG + P+ DV R + + + S + C + ++C
Sbjct: 3859 NGQLIEIDLETDHISINGNPQPILPLKLGDVNIHRD-LDVLSITSDTEFSLHCNVQFDLC 3917
Query: 222 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQ 380
+ E +G+Y G+ GLLG NNEPYD++ + +G I F +++ L + C Q
Sbjct: 3918 WFEVSGWYFGRTAGLLGTLNNEPYDEYTMSSGVISNETQLFTDSWSL-KQCRQ 3969
>AE014296-2310|AAF49795.2| 3843|Drosophila melanogaster CG7002-PA
protein.
Length = 3843
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +3
Query: 33 ILEDKSGAIIELKENGQAILNGASKGFPIIEK-----DVFAFRQPSNRIGVGSLYGLMVF 197
IL D + ++I+L + I+N K + K +V R S + V G+ V+
Sbjct: 919 ILRDGTPSVIKLDQGLTTIVN--DKPIAKLPKMLGLGEVLIRRASSTFLTVEFADGIRVW 976
Query: 198 CTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCP 377
V YI+A G+ +GL G N+ DDF P G + T+ F + +R +C
Sbjct: 977 WDGVSRV-YIDAPPSLRGQTQGLCGTFNSNTQDDFLTPEGDVETAVEPFADKWRTKDTC- 1034
Query: 378 QVQAPEHSHHQLHDASLPP 434
Q +H H +L P
Sbjct: 1035 --QFKAETHQGPHPCTLNP 1051
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 222 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAP 392
Y++ + K+ GL G+ N DD + P+ + TS FG+A++L C AP
Sbjct: 1468 YVKLGNEWRQKVSGLCGNYNGNSLDDMQTPSMGLETSPMLFGHAWKLQPHCSAPVAP 1524
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 60 IELKENGQAILNGASKGFPIIEKDVFAFRQPSNRI-GVGSLYGLMVFCTSKLEVCYIEAN 236
++LK NG PI K F QP + V + YG V + + + +
Sbjct: 2773 LKLKFNGYEFTVQQLINSPIC-KASFVVSQPGKTLLAVSTKYGFWVQLDD-IGIVKVGIS 2830
Query: 237 GFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAY 356
++ + GL G N DD R P+G+I + +FG+++
Sbjct: 2831 SKFIRTVDGLCGYYNGNQKDDKRSPDGQIIPNTEKFGDSW 2870
>AB035891-1|BAA88518.1| 3843|Drosophila melanogaster hemolectin
protein.
Length = 3843
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +3
Query: 33 ILEDKSGAIIELKENGQAILNGASKGFPIIEK-----DVFAFRQPSNRIGVGSLYGLMVF 197
IL D + ++I+L + I+N K + K +V R S + V G+ V+
Sbjct: 919 ILRDGTPSVIKLDQGLTTIVN--DKPIAKLPKMLGLGEVLIRRASSTFLTVEFADGIRVW 976
Query: 198 CTSKLEVCYIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCP 377
V YI+A G+ +GL G N+ DDF P G + T+ F + +R +C
Sbjct: 977 WDGVSRV-YIDAPPSLRGQTQGLCGTFNSNTQDDFLTPEGDVETAVEPFADKWRTKDTC- 1034
Query: 378 QVQAPEHSHHQLHDASLPP 434
Q +H H +L P
Sbjct: 1035 --QFKAETHQGPHPCTLNP 1051
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 222 YIEANGFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAP 392
Y++ + K+ GL G+ N DD + P+ + TS FG+A++L C AP
Sbjct: 1468 YVKLGNEWRQKVSGLCGNYNGNSLDDMQTPSMGLETSPMLFGHAWKLQPHCSAPVAP 1524
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +3
Query: 60 IELKENGQAILNGASKGFPIIEKDVFAFRQPSNRI-GVGSLYGLMVFCTSKLEVCYIEAN 236
++LK NG PI K F QP + V + YG V + + + +
Sbjct: 2773 LKLKFNGYEFTVQQLINSPIC-KASFVVSQPGKTLLAVSTKYGFWVQLDD-IGIVKVGIS 2830
Query: 237 GFYLGKLRGLLGDGNNEPYDDFRLPNGKICTSESEFGNAY 356
++ + GL G N DD R P+G+I + +FG+++
Sbjct: 2831 SKFIRTVDGLCGYYNGNQKDDKRSPDGQIIPNTEKFGDSW 2870
>BT011360-1|AAR96152.1| 1240|Drosophila melanogaster RE69185p protein.
Length = 1240
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 243 YLGKLRGLLGDGNNEPYDDFRLPNGKI 323
++ K GL G+ + DDF LPNG++
Sbjct: 975 FINKTAGLFGNWSFNKLDDFMLPNGQV 1001
>AY122109-1|AAM52621.1| 868|Drosophila melanogaster GH12365p
protein.
Length = 868
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 243 YLGKLRGLLGDGNNEPYDDFRLPNGKI 323
++ K GL G+ + DDF LPNG++
Sbjct: 412 FINKTAGLFGNWSFNKLDDFMLPNGQV 438
>AY047545-1|AAK77277.1| 224|Drosophila melanogaster GH05836p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 103 PKDS-RSSKRMCSLSVNQATESVLAHCTVSWSSAHLNLRCATLKLTASTWVNFAVFSETV 279
P DS R+ R C VN + AH + HLNL+ +K T + +N + S +
Sbjct: 26 PDDSYRAHCRFCKCCVNTKISDLRAHASTKKHMKHLNLK-QQIKTTDDSPLNRSSASSSS 84
Query: 280 TT 285
TT
Sbjct: 85 TT 86
>AE014297-4713|AAF57123.2| 1431|Drosophila melanogaster CG31004-PB,
isoform B protein.
Length = 1431
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 243 YLGKLRGLLGDGNNEPYDDFRLPNGKI 323
++ K GL G+ + DDF LPNG++
Sbjct: 975 FINKTAGLFGNWSFNKLDDFMLPNGQV 1001
>AE014297-4712|AAF57124.2| 1431|Drosophila melanogaster CG31004-PA,
isoform A protein.
Length = 1431
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 243 YLGKLRGLLGDGNNEPYDDFRLPNGKI 323
++ K GL G+ + DDF LPNG++
Sbjct: 975 FINKTAGLFGNWSFNKLDDFMLPNGQV 1001
>AE013599-1930|AAF58225.1| 224|Drosophila melanogaster CG10139-PA
protein.
Length = 224
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 103 PKDS-RSSKRMCSLSVNQATESVLAHCTVSWSSAHLNLRCATLKLTASTWVNFAVFSETV 279
P DS R+ R C VN + AH + HLNL+ +K T + +N + S +
Sbjct: 26 PDDSYRAHCRFCKCCVNTKISDLRAHASTKKHMKHLNLK-QQIKTTDDSPLNRSSASSSS 84
Query: 280 TT 285
TT
Sbjct: 85 TT 86
>AE014298-979|AAF46221.2| 1027|Drosophila melanogaster CG14431-PA
protein.
Length = 1027
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 350 RVPSGPQLSTGASARTLPSPAARCIPPP 433
RVP+ P L+ AR+ P+PAA PPP
Sbjct: 454 RVPAPPALAPAPPARS-PTPAAAAPPPP 480
>AE014298-2690|AAF48815.1| 432|Drosophila melanogaster CG5988-PA
protein.
Length = 432
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 414 HDASLPPPANRSSGEYRRSGPCHXSWTC 497
H SLP A++ S R S H SW+C
Sbjct: 7 HPPSLPLAASQQSQSSRSSRSAHSSWSC 34
>BT016059-1|AAV36944.1| 1691|Drosophila melanogaster LP14319p
protein.
Length = 1691
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 116 RESFGSSVQNSLSIFFQFDDSSALIFQNKSLGFSVLK 6
R SF S + + + +FQ D+S+ ++ Q K++ S K
Sbjct: 299 RYSFASGMPGNYADYFQIDESTGVLKQTKAVDTSTAK 335
>AY853687-1|AAX12107.1| 1706|Drosophila melanogaster cadherin 99C
protein.
Length = 1706
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 116 RESFGSSVQNSLSIFFQFDDSSALIFQNKSLGFSVLK 6
R SF S + + + +FQ D+S+ ++ Q K++ S K
Sbjct: 314 RYSFASGMPGNYADYFQIDESTGVLKQTKAVDTSTAK 350
>AY853686-1|AAX12106.1| 1706|Drosophila melanogaster cadherin 99C
protein.
Length = 1706
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 116 RESFGSSVQNSLSIFFQFDDSSALIFQNKSLGFSVLK 6
R SF S + + + +FQ D+S+ ++ Q K++ S K
Sbjct: 314 RYSFASGMPGNYADYFQIDESTGVLKQTKAVDTSTAK 350
>AY069587-1|AAL39732.2| 639|Drosophila melanogaster LD33388p
protein.
Length = 639
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 363 ARSCPQVQAPEHSHHQLHDASLPPPANRSSGEYRRSGP 476
A + V +P+H HHQ PPP + +Y+ P
Sbjct: 294 AAAAAAVGSPKHHHHQQQQQPAPPPQQQQQ-QYQPQPP 330
>AY058785-1|AAL14014.1| 1068|Drosophila melanogaster SD08329p
protein.
Length = 1068
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 363 ARSCPQVQAPEHSHHQLHDASLPPPANRSSGEYRRSGP 476
A + V +P+H HHQ PPP + +Y+ P
Sbjct: 724 AAAAAAVGSPKHHHHQQQQQPAPPPQQQQQ-QYQPQPP 760
>AY058338-1|AAL13567.1| 689|Drosophila melanogaster GH11223p
protein.
Length = 689
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 300 FRLPNGKICTSES--EFGNAYRLARSCPQVQAPEHS 401
FR P K C S + FG+ YRLA AP+H+
Sbjct: 639 FRPPQSKTCLSLNLHRFGDKYRLAVMADTHLAPDHT 674
>AE014297-4457|AAF56955.2| 1706|Drosophila melanogaster CG31009-PA
protein.
Length = 1706
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 116 RESFGSSVQNSLSIFFQFDDSSALIFQNKSLGFSVLK 6
R SF S + + + +FQ D+S+ ++ Q K++ S K
Sbjct: 314 RYSFASGMPGNYADYFQIDESTGVLKQTKAVDTSTAK 350
>AE014296-1756|AAS65048.1| 107|Drosophila melanogaster CG33273-PA
protein.
Length = 107
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2
Query: 160 LLLG*RKANTSFSMIGNPLEAPFRIACPFSFNSMIA 53
LLL + AN S G L R+ACP FNSM A
Sbjct: 15 LLLSAQAAN-SLRACGPALMDMLRVACPNGFNSMFA 49
>AE014296-109|AAN11444.1| 1340|Drosophila melanogaster CG17090-PB,
isoform B protein.
Length = 1340
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 363 ARSCPQVQAPEHSHHQLHDASLPPPANRSSGEYRRSGP 476
A + V +P+H HHQ PPP + +Y+ P
Sbjct: 995 AAAAAAVGSPKHHHHQQQQQPAPPPQQQQQ-QYQPQPP 1031
>AE014296-108|AAF47392.2| 1340|Drosophila melanogaster CG17090-PA,
isoform A protein.
Length = 1340
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 363 ARSCPQVQAPEHSHHQLHDASLPPPANRSSGEYRRSGP 476
A + V +P+H HHQ PPP + +Y+ P
Sbjct: 995 AAAAAAVGSPKHHHHQQQQQPAPPPQQQQQ-QYQPQPP 1031
>AE014134-2986|AAF53716.2| 689|Drosophila melanogaster CG33120-PA
protein.
Length = 689
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 300 FRLPNGKICTSES--EFGNAYRLARSCPQVQAPEHS 401
FR P K C S + FG+ YRLA AP+H+
Sbjct: 639 FRPPQSKTCLSLNLHRFGDKYRLAVMADTHLAPDHT 674
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,532,000
Number of Sequences: 53049
Number of extensions: 585367
Number of successful extensions: 2431
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2427
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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