Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C01f
(447 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 217 1e-55
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 143 1e-33
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 129 3e-29
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 124 9e-28
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 124 1e-27
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 118 4e-26
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 115 4e-25
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 103 1e-21
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 93 2e-18
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 89 3e-17
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 86 4e-16
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 86 4e-16
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 79 6e-14
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 78 1e-13
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 75 9e-13
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 75 9e-13
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 74 1e-12
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 74 1e-12
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 73 2e-12
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 72 7e-12
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 67 2e-10
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 63 2e-09
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 63 3e-09
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 62 4e-09
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 62 5e-09
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 61 9e-09
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 60 3e-08
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 60 3e-08
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 55 8e-07
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 52 4e-06
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 50 2e-05
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 50 2e-05
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 42 0.005
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 41 0.014
UniRef50_Q9AA22 Cluster: Putative uncharacterized protein; n=1; ... 35 0.70
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 35 0.70
UniRef50_Q6ZS94 Cluster: CDNA FLJ45717 fis, clone FELNG2001613; ... 35 0.92
UniRef50_Q6ABZ1 Cluster: Serine/threonine kinase; n=1; Leifsonia... 34 1.2
UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus carot... 34 1.6
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 33 2.1
UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin... 33 2.8
UniRef50_UPI0000DA292B Cluster: PREDICTED: similar to Calpain sm... 33 3.7
UniRef50_Q5YTC3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_Q3JNY9 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_O84054 Cluster: Putative uncharacterized protein; n=3; ... 33 3.7
UniRef50_Q2UIN9 Cluster: Predicted protein; n=1; Aspergillus ory... 33 3.7
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 32 4.9
UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10; Chlorob... 32 4.9
UniRef50_UPI00015B59E8 Cluster: PREDICTED: hypothetical protein;... 28 5.8
UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplas... 32 6.5
UniRef50_UPI0000EBDEE2 Cluster: PREDICTED: hypothetical protein;... 31 8.6
UniRef50_UPI0000E1E883 Cluster: PREDICTED: similar to Evin1; n=1... 31 8.6
UniRef50_UPI0000D9D69E Cluster: PREDICTED: similar to beta1,4-N-... 31 8.6
UniRef50_Q8YEE0 Cluster: OLIGOPEPTIDE TRANSPORT ATP-BINDING PROT... 31 8.6
UniRef50_A3WCD2 Cluster: Putative uncharacterized protein; n=1; ... 31 8.6
UniRef50_A0TTJ0 Cluster: Putative uncharacterized protein; n=1; ... 31 8.6
UniRef50_A5BBR4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.6
UniRef50_A0NFE5 Cluster: ENSANGP00000023517; n=1; Anopheles gamb... 31 8.6
UniRef50_A4QYE9 Cluster: Predicted protein; n=1; Magnaporthe gri... 31 8.6
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 217 bits (529), Expect = 1e-55
Identities = 101/122 (82%), Positives = 107/122 (87%)
Frame = -2
Query: 446 SXRYKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 267
S RYKL+GGLAVRRACYGVLRFIME GA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP
Sbjct: 104 SLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 163
Query: 266 CNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPT 87
N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P
Sbjct: 164 VNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPI 223
Query: 86 SE 81
SE
Sbjct: 224 SE 225
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 143 bits (347), Expect = 1e-33
Identities = 65/108 (60%), Positives = 83/108 (76%)
Frame = -2
Query: 413 VRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRH 234
VR ACYGVLR+IME GA+G EVVVSGKLRGQRAK+MKF DG MI SG+P DY+ + TRH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 233 VLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP 90
LLRQG +G++VKIML D +G++GP P PD +++ PK++ +P
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAKP 137
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 129 bits (311), Expect = 3e-29
Identities = 67/121 (55%), Positives = 82/121 (67%)
Frame = -2
Query: 434 KLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDY 255
KL+ GL +RRA YGVLRF M GA+G EVV+SGKLR RAKS K+ DG MIHSG P D+
Sbjct: 109 KLLSGLPIRRAAYGVLRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDF 168
Query: 254 VNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVR 75
++ A RHVL+RQGVLGIKVKIM + GP + PD + + E KDE + P V+
Sbjct: 169 IDIAIRHVLMRQGVLGIKVKIMKD-PAANRFGP-RALPDAVKIAEAKDEDEVI-PAPTVK 225
Query: 74 S 72
S
Sbjct: 226 S 226
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 124 bits (299), Expect = 9e-28
Identities = 56/110 (50%), Positives = 77/110 (70%)
Frame = -2
Query: 440 RYKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN 261
R K++GG+ RRA L+ A+GC+++VSGKL+GQRAKS+KF DG++IHSGD
Sbjct: 117 REKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVK 176
Query: 260 DYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 111
DY+NT V +QGV+GI+V+IMLP+D +G GP P PD I + EP +
Sbjct: 177 DYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 124 bits (298), Expect = 1e-27
Identities = 57/112 (50%), Positives = 75/112 (66%)
Frame = -2
Query: 446 SXRYKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 267
S RYKLI + RRA Y ++RF+M+ GARGCEV +SGKLRG RA + K+ +G M+ SGD
Sbjct: 105 SLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKLRGARASTSKYKEGYMVKSGDV 164
Query: 266 CNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKD 111
+V A H+ ++Q +GI+V IML D G +GPK+ QPD I V E KD
Sbjct: 165 TKQFVTQAVGHIPMKQATIGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 118 bits (285), Expect = 4e-26
Identities = 52/110 (47%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Frame = -2
Query: 437 YKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 258
YKL+ + VR A +++ +++ GA+GCE+++SGKL+ QRAK+MKF G MI +G P ND
Sbjct: 120 YKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISGKLKQQRAKTMKFKQGYMICTGQPKND 179
Query: 257 YVNTATRHVLLRQGVLGIKVKIMLPWDQQ--GKNGPKKPQPDHILVTEPK 114
Y++ A RHV +QG++G+KVKIMLP++ K G K P PD++++ PK
Sbjct: 180 YIDVAVRHVFFKQGIMGVKVKIMLPYEPNPAKKFGVKTPIPDNVIIHPPK 229
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 115 bits (277), Expect = 4e-25
Identities = 58/111 (52%), Positives = 73/111 (65%)
Frame = -2
Query: 446 SXRYKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 267
S R+KL+ L VRRA G++R++ME GA+GCEV + GK++GQRAKSM F DG MI SG
Sbjct: 155 SLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTA 214
Query: 266 CNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 114
+V+TATRH LR G +G+ VKIM P Q + PD I V EPK
Sbjct: 215 HKHFVDTATRHCHLRAGTIGVNVKIMRP---QSMIEEDEVLPDVITVIEPK 262
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 103 bits (248), Expect = 1e-21
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -2
Query: 323 QRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQ 144
QRAKSMKF DG M+ SG P +Y+++A RHVLLRQGVLGIKVKIML WD GK GPK P
Sbjct: 2 QRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPKTPL 61
Query: 143 PDHILVTEPK 114
PD++++ PK
Sbjct: 62 PDNVVIHMPK 71
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 93.5 bits (222), Expect = 2e-18
Identities = 42/86 (48%), Positives = 60/86 (69%)
Frame = -2
Query: 440 RYKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCN 261
R KL + +RRA Y ++R M GA GCEV+V+GKLR QRA++ KF +G +I +G P
Sbjct: 112 RAKLEEAMPIRRAAYSIIRTAMRAGAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKR 171
Query: 260 DYVNTATRHVLLRQGVLGIKVKIMLP 183
++ ATRH+ +RQGV+G+KV+I P
Sbjct: 172 IFLAEATRHIKMRQGVIGVKVRIYNP 197
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 89.4 bits (212), Expect = 3e-17
Identities = 48/97 (49%), Positives = 60/97 (61%)
Frame = -2
Query: 446 SXRYKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 267
S R+KL+GGL VRRA YGVL F+ME G +GCEV+ +I SG P
Sbjct: 158 SLRFKLLGGLVVRRAGYGVLSFVMESGTKGCEVI----------------GWYIISSGQP 201
Query: 266 CNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGP 156
DY+N+ RHVLL+QGVL IKVKI++ QG+ GP
Sbjct: 202 VKDYINSVVRHVLLKQGVLSIKVKIIVRLGSQGQAGP 238
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 85.8 bits (203), Expect = 4e-16
Identities = 42/69 (60%), Positives = 49/69 (71%)
Frame = -2
Query: 380 IMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIK 201
+ E GA+G E +VSGKL+GQRAKS KFVD MIHS D N YV+T+ HVLLRQGVLG K
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSK 139
Query: 200 VKIMLPWDQ 174
+ P Q
Sbjct: 140 CRSCFPGTQ 148
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 85.8 bits (203), Expect = 4e-16
Identities = 42/72 (58%), Positives = 48/72 (66%)
Frame = -2
Query: 332 LRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPK 153
L QRAKSMKF DG +I SG P DY++ A RHV LRQGVLGIKVKIM WD +GK
Sbjct: 116 LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQGVLGIKVKIMFNWDPKGKQSLT 174
Query: 152 KPQPDHILVTEP 117
P PD + + P
Sbjct: 175 TPLPDLVTIQTP 186
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 78.6 bits (185), Expect = 6e-14
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G+ RRA Y LR IM GARG E+ +SGKL G+RAKS++F G + G+P V+
Sbjct: 106 GIHFRRAAYAALRAIMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKG 165
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
LL+ GV+G+KV IM P
Sbjct: 166 YAQALLKLGVIGVKVAIMPP 185
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 77.8 bits (183), Expect = 1e-13
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = -2
Query: 431 LIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 252
L+ G+ RRA L IM GARG E+V+SGKL QR ++ KF G + SG+P + V
Sbjct: 104 LVRGVRFRRAALVALNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELV 163
Query: 251 NTATRHVLLRQGVLGIKVKIMLP 183
+ A HVLL+ G+ G+KV+IM P
Sbjct: 164 DEAIVHVLLKLGMYGVKVRIMKP 186
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 74.5 bits (175), Expect = 9e-13
Identities = 32/80 (40%), Positives = 52/80 (65%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G+ R+ + +R +M GA+G ++VSGKL G+R+++ KF+DG M H G+P VN +
Sbjct: 105 GMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS 164
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
+ L+ G++G+ VKIM P
Sbjct: 165 HQLAKLKLGIVGVTVKIMRP 184
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 74.5 bits (175), Expect = 9e-13
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G RRA Y L IME GA+GCE+ +SGKL +RA++ KFV G ++H+GDP V
Sbjct: 105 GWYFRRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMVQKG 164
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
+ + GVLG+ V+I+ P
Sbjct: 165 FDIAIKKLGVLGVSVRIIPP 184
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 74.1 bits (174), Expect = 1e-12
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G R+A +R IME GA GCEV+V+GKL G R+++ KF +G + H G+P V
Sbjct: 106 GWYFRKAGSSTIRRIMESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIVEKG 165
Query: 242 TRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV-PLEP 90
+ + G +G++VKI+ P + P +L EPK P P+EP
Sbjct: 166 YALAIKKLGTIGVQVKIVPP-------DARLPDAFDVLEPEPKKAPAEPIEP 210
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 74.1 bits (174), Expect = 1e-12
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G R+A + LR +M GA GCEVV+SGKL G R++ KFVDG + HSG+P + V+
Sbjct: 106 GWYFRKAGHNTLRAVMNAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEG 165
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
+ + G LG KV+I+ P
Sbjct: 166 FAVAVKKLGTLGCKVRIIQP 185
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 73.3 bits (172), Expect = 2e-12
Identities = 42/114 (36%), Positives = 59/114 (51%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G+ RR Y +R IM GA+G EV +SGK+RG R+ + KF DG + G+P +V
Sbjct: 105 GMHFRRVAYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSVKHVREG 164
Query: 242 TRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 81
V L+ GVLG+ V+IM P PD + + +P+ P E SE
Sbjct: 165 FATVQLKPGVLGVYVRIM---------PPDVVLPDKVEIEDPRVTETPAEEASE 209
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 71.7 bits (168), Expect = 7e-12
Identities = 32/80 (40%), Positives = 52/80 (65%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G+ RRA YG LR IM GA+G +++SGKL G RA++ KF++G + + G+P ++Y+
Sbjct: 114 GIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYMIEG 173
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
+ + G +G+ V+IM P
Sbjct: 174 YVQAVTKPGAIGVTVRIMPP 193
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 66.9 bits (156), Expect = 2e-10
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G RRA Y LR IM GA G +V VSGKLRG+RA+ K++ G + SG+ + A
Sbjct: 111 GFHFRRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRA 170
Query: 242 TRHVLLRQGVLGIKVKIMLPWDQQGKNGP---KKPQPDHILVTEPKDEPVPLEP 90
HVLL+ GV G++V I +++ + K P+ + +V + ++E +P
Sbjct: 171 IAHVLLKVGVEGVEVIISKKSEEERPDDEVRIKSPEEVNEIVQKIREEMQQTQP 224
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 63.3 bits (147), Expect = 2e-09
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = -2
Query: 410 RRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 231
R + LRF++ G RGC + + G R +R K+ KF GL+ HSG ND++++ + ++
Sbjct: 158 RSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYL 217
Query: 230 LLRQGVLGIKVKIM 189
++G LGI +KIM
Sbjct: 218 NKKRGTLGINIKIM 231
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 62.9 bits (146), Expect = 3e-09
Identities = 31/76 (40%), Positives = 47/76 (61%)
Frame = -2
Query: 410 RRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 231
RR +LR +ME GA G E+++SGKLR +RA+ K G + +GD + V+ A
Sbjct: 113 RRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKA 172
Query: 230 LLRQGVLGIKVKIMLP 183
LL++GV G++V I+ P
Sbjct: 173 LLKRGVYGVEVVIVRP 188
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 62.5 bits (145), Expect = 4e-09
Identities = 29/80 (36%), Positives = 50/80 (62%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G R+A + + IME GA G E+V+SGK+ G R++ KF G + H+G+P + V++
Sbjct: 106 GWYFRKAGHTTIDRIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSG 165
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
+++ G +G++VKI+ P
Sbjct: 166 VGVAVMKLGTIGVRVKIIPP 185
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 62.1 bits (144), Expect = 5e-09
Identities = 32/106 (30%), Positives = 60/106 (56%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G+ RRA LR + E +G EV++SGKL +R++ K+ G++I +G + V A
Sbjct: 104 GIRFRRAAIIALRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEA 163
Query: 242 TRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEP 105
VLL+ G+ ++V++ LP D + + + P+ + V + +++P
Sbjct: 164 VIPVLLKPGIFSVRVRV-LPPDAKLSDRFEVKSPEEVQVKQIENKP 208
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 61.3 bits (142), Expect = 9e-09
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G+ RR + +R +ME GA+G E+VVSGKL +RA+ K G + G + V A
Sbjct: 116 GVRFRRVMFVAIRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRA 175
Query: 242 TRHVLLRQGVLGIKVKI 192
HVLL+ G+ GI+V+I
Sbjct: 176 VVHVLLKPGIYGIEVRI 192
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 59.7 bits (138), Expect = 3e-08
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G RRA + +R IM GA G E+++SGKL +RA+ K +G++ SG ++ A
Sbjct: 107 GYHFRRAAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRA 166
Query: 242 TRHVLLRQGVLGIKVKIMLPWDQQGK-NGPKKPQ-PDHILVT 123
+L+ G+ G++V I P + K N + P P + VT
Sbjct: 167 IAIAMLKPGIFGVEVVITKPLKIEDKINLKESPSVPQEVSVT 208
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 59.7 bits (138), Expect = 3e-08
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G RRA + +R IM GA G EV+VSGKL +RAK K +G + SG ++ A
Sbjct: 107 GYHFRRAAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRA 166
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
+L+ GV G++V I P
Sbjct: 167 IGIAMLKPGVYGVEVVITKP 186
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 54.8 bits (126), Expect = 8e-07
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G + R+A L ++ GA+G + +SGK+ G+RA+ KF+ G + +SG+P + + T
Sbjct: 105 GWSYRKAGNTSLNRTIQAGAKGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMITG 164
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
L+ G+LG+ VKI+ P
Sbjct: 165 FSTAKLKVGILGVTVKILNP 184
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 52.4 bits (120), Expect = 4e-06
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTA 243
G RRA + + IM+ GARGC +++SGK+ G R + KF G + G+ +++
Sbjct: 110 GWFFRRAGHSTAQNIMDAGARGCLIILSGKISGPRHRVQKFQQGHIKFCGETALQFMDEG 169
Query: 242 TRHVLLRQGVLGIKVKIMLP 183
+ + G +G V+IM P
Sbjct: 170 FSTAVKKLGTVGCTVRIMRP 189
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = -2
Query: 416 AVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATR 237
A RR L IM GA G E+V++G+L GQR K+ +F G + +G ++ A
Sbjct: 108 AYRRLAQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFN 167
Query: 236 HVLLRQGVLGIKVKIMLP 183
L+ GV GI V I+ P
Sbjct: 168 IAYLKPGVAGIHVTILKP 185
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/82 (26%), Positives = 49/82 (59%)
Frame = +3
Query: 189 HDFDLDS*YSLPEKHMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGT 368
H+ D D+ +L +H+S +V+ ++ ++RVDHE++ L G+ ++Q +N T T
Sbjct: 82 HNLDSDTQNTLSHQHVSDGNVNKVVGWLTRVDHETVRVLLRLGSSSSQFTGDDNLHTLST 141
Query: 369 XFHDETENTIASTTYSETSDKL 434
H ++++T+ +++ +T +L
Sbjct: 142 SSHGKSQHTVGGSSHWQTVQQL 163
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 50.0 bits (114), Expect = 2e-05
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = -2
Query: 422 GLAVRRACYGVLRFIMEX-GARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNT 246
G A RRA ++ IME A G ++ +SGKLRG R+ K G++ +G + V
Sbjct: 106 GTAFRRATMWTIQQIMEKKDAMGVQITISGKLRGDRSAFEKHTSGILPRAGHYADVIVLD 165
Query: 245 ATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPV 102
HV G++GI+++I D+ K+ K + D + +P+ V
Sbjct: 166 DVVHVKTPMGLIGIRIRIARR-DKFRKDFEMKAEKDVVPAPKPEHHDV 212
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 42.3 bits (95), Expect = 0.005
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = -2
Query: 416 AVRRACYGVLRFIMEXGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIHSGDPCNDYVNTA 243
A RRA + +ME GARG +V++SG+L G ++A++ K ++G + +H+ DY
Sbjct: 130 AFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLRADIDYGTAL 189
Query: 242 TRHVLLRQGVLGIKVKI 192
R G+LGIKV +
Sbjct: 190 AR---TTYGILGIKVLV 203
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 40.7 bits (91), Expect = 0.014
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = -2
Query: 434 KLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIHSGDPCN 261
+L G +A RRA + M GA G ++ VSG+L G + A+S F +G +H+
Sbjct: 122 QLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKEGRTPLHTLRADI 181
Query: 260 DYVNTATRHVLLRQGVLGIKVKI 192
DY A L + G+LGIKV I
Sbjct: 182 DY---ALAEALTKVGLLGIKVWI 201
>UniRef50_Q9AA22 Cluster: Putative uncharacterized protein; n=1;
Caulobacter vibrioides|Rep: Putative uncharacterized
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 1026
Score = 35.1 bits (77), Expect = 0.70
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 42 DRLRQRRGREGAHFAGRLEGHGLVLGLCHQD 134
DR R+ GR+GA GRL G GL +G+ H +
Sbjct: 491 DRRRRPAGRDGAPVIGRLAGGGLAIGVAHAE 521
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 35.1 bits (77), Expect = 0.70
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -2
Query: 419 LAVRRACYGVLRFIMEXGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIHSGDPCNDYVNT 246
++ RRA + M GA G +++ SG+L G + A+S ++ +G + +H+ DY
Sbjct: 127 ISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLHTFRADIDY--- 183
Query: 245 ATRHVLLRQGVLGIKVKI 192
A L G +G+KV I
Sbjct: 184 ALAEALTTYGKIGVKVWI 201
>UniRef50_Q6ZS94 Cluster: CDNA FLJ45717 fis, clone FELNG2001613;
n=1; Homo sapiens|Rep: CDNA FLJ45717 fis, clone
FELNG2001613 - Homo sapiens (Human)
Length = 237
Score = 34.7 bits (76), Expect = 0.92
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = -1
Query: 234 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPR 94
CAS RS R Q Q P P A RP PG APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>UniRef50_Q6ABZ1 Cluster: Serine/threonine kinase; n=1; Leifsonia
xyli subsp. xyli|Rep: Serine/threonine kinase -
Leifsonia xyli subsp. xyli
Length = 974
Score = 34.3 bits (75), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 204 QGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPR 94
+G A G A + PE R H GD A G RAPR
Sbjct: 830 RGARDAAAGAAERHGPEWGPARDHGGDAAAGAVRAPR 866
>UniRef50_Q39682 Cluster: Glycine-rich protein; n=1; Daucus
carota|Rep: Glycine-rich protein - Daucus carota
(Carrot)
Length = 111
Score = 33.9 bits (74), Expect = 1.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 396 WCSPFHHGXWCPWL*SCCIWQAAWSTCQINEVCRW 292
W P G WC W C IW S C+ RW
Sbjct: 32 WWIPPRRGRWCWWRCRCWIWSRLRSWCRSRRRIRW 66
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 33.5 bits (73), Expect = 2.1
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -2
Query: 419 LAVRRACYGVLRFIMEXGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNT 246
+A RRA G ++ + GA+G +VSG+L G A+ ++ +G + +H+ DY
Sbjct: 135 VAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTVPLHTLRADIDY--- 191
Query: 245 ATRHVLLRQGVLGIKVKI 192
+ + G LGIK I
Sbjct: 192 SWDEAMTSYGNLGIKTWI 209
>UniRef50_Q5SCB4 Cluster: Cyclin H; n=2; Ostreococcus|Rep: Cyclin H
- Ostreococcus tauri
Length = 322
Score = 33.1 bits (72), Expect = 2.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -2
Query: 428 IGGLAVRRACYGVLR----FIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMI 282
+ GL R CYG R F+M+ GC+ S +L R K++ VD LM+
Sbjct: 146 LSGLKFRLVCYGATRPLDGFLMDVEDGGCKGATSKQLIECRKKALDIVDRLML 198
>UniRef50_UPI0000DA292B Cluster: PREDICTED: similar to Calpain small
subunit 1 (CSS1) (Calcium-dependent protease small
subunit 1) (Calcium-dependent protease small subunit)
(CDPS) (Calpain regulatory subunit) (Calcium-activated
neutral proteinase small subunit) (CANP small
subunit)...; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Calpain small subunit 1 (CSS1)
(Calcium-dependent protease small subunit 1)
(Calcium-dependent protease small subunit) (CDPS)
(Calpain regulatory subunit) (Calcium-activated neutral
proteinase small subunit) (CANP small subunit)... -
Rattus norvegicus
Length = 165
Score = 32.7 bits (71), Expect = 3.7
Identities = 25/52 (48%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 94 SRGTGSSLGSVTR-MWSGCGFFGPFLPCWSHGNMILTLIPSTPCLRSTCLVA 246
SRG G SLG V R + SG G C G +I T IPST L ST L A
Sbjct: 39 SRGLGGSLGKVLRGLISGAAGSGGTAMCGVLGGVIST-IPSTRLLCSTTLSA 89
>UniRef50_Q5YTC3 Cluster: Putative uncharacterized protein; n=1;
Nocardia farcinica|Rep: Putative uncharacterized protein
- Nocardia farcinica
Length = 1172
Score = 32.7 bits (71), Expect = 3.7
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = -1
Query: 243 YQTCASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRAD 88
+Q +A + R + A G AR E P A T P PG R RA RAD
Sbjct: 592 FQPTGRRAAAERADAHDTAAEGHARTEPPRGAVTEPAPGGR---RAAGQRAD 640
>UniRef50_Q3JNY9 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 961
Score = 32.7 bits (71), Expect = 3.7
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -1
Query: 273 RPLQ*LRQHCYQTCASQARSTRN-QGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAP 97
R L R+H + A +AR + + H+ P RQ+RP PH G R GR R
Sbjct: 236 RRLHAAREHQHAALAPRARPREQARARRHLVAQPLRQQRP-HVLAEPHHG-REHGRVRHE 293
Query: 96 RADQ 85
+Q
Sbjct: 294 AREQ 297
>UniRef50_O84054 Cluster: Putative uncharacterized protein; n=3;
Chlamydia|Rep: Putative uncharacterized protein -
Chlamydia trachomatis
Length = 520
Score = 32.7 bits (71), Expect = 3.7
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = -2
Query: 317 AKSMKFVDGLM--IHSGDPCNDYVNTAT---RHVLLRQGVLGIKVKIMLPWDQQGKNGPK 153
A ++K+V G++ I + D + +N+AT + + L Q LGI++ I D +
Sbjct: 167 AATVKYVKGIVDKILNNDKLSTALNSATEVEKKIALAQKALGIEITINPDADTNPDTDQE 226
Query: 152 KPQPDHILVTEPKDEP 105
P P + TE K+ P
Sbjct: 227 TPDPAPVADTEEKESP 242
>UniRef50_Q2UIN9 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 258
Score = 32.7 bits (71), Expect = 3.7
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = -1
Query: 309 NEVCRWTHDPLWRPLQ*LRQHCYQTCASQARSTRNQGQNHVAVGPARQERPEEATTRPHP 130
N+ R P W+ LQ LR+ Q + A S+ Q A GP+ + PE T H
Sbjct: 163 NDPTRPDPGPTWKVLQHLREKAAQRRGNVAMSSPTQ-----AHGPSDERVPESRTAEQHS 217
Query: 129 GDRAQG 112
G +G
Sbjct: 218 GQELEG 223
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.3 bits (70), Expect = 4.9
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 401 CYGVLRFI-MEXGARGCEVVVSGKLRGQRAKSMK 303
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
>UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10;
Chlorobiaceae|Rep: 30S ribosomal protein S3 - Chlorobium
tepidum
Length = 253
Score = 32.3 bits (70), Expect = 4.9
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = -2
Query: 437 YKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRG-QRAKSMKFVDG-LMIHSGDPC 264
Y+L ++ RRA ++ M GA G + +G+L G + A++ ++ +G + +H+
Sbjct: 124 YQLENRVSFRRAMKMAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTLRAN 183
Query: 263 NDYVNTATRHVLLRQGVLGIKV 198
DY + T H + G +GIKV
Sbjct: 184 VDYA-SVTAHTI--AGAIGIKV 202
>UniRef50_UPI00015B59E8 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 271
Score = 28.3 bits (60), Expect(2) = 5.8
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -2
Query: 380 IMEXGARGCEVV---VSGKLRGQRAKSMKFVDGLMIHSGDP 267
I AR C V+ V KL+ +A K VDG I++G P
Sbjct: 54 IPRQSARYCHVIFPNVEEKLKNMKALKKKLVDGKPIYAGPP 94
Score = 22.6 bits (46), Expect(2) = 5.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 155 KKPQPDHILVTEPKDEP 105
KKP+ I+V +P D+P
Sbjct: 103 KKPKQKKIVVPDPTDDP 119
>UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S3 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 257
Score = 31.9 bits (69), Expect = 6.5
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = -2
Query: 392 VLRFIMEXGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQ 219
V++ +++ GARG + VSG+L G + A+ + G+M +H+ DY + +
Sbjct: 140 VIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHTLRADIDY---SMQEAHTTY 196
Query: 218 GVLGIKVKI 192
G++G+KV I
Sbjct: 197 GIIGVKVWI 205
>UniRef50_UPI0000EBDEE2 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 180
Score = 31.5 bits (68), Expect = 8.6
Identities = 18/33 (54%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 186 AVGP-ARQERPEEATTRPHPGDRAQGRARAPRA 91
AV P AR+ A T P PG RA GR RAP A
Sbjct: 78 AVSPGARKPHFGAAATHPAPGGRAGGRGRAPGA 110
>UniRef50_UPI0000E1E883 Cluster: PREDICTED: similar to Evin1; n=1;
Pan troglodytes|Rep: PREDICTED: similar to Evin1 - Pan
troglodytes
Length = 194
Score = 31.5 bits (68), Expect = 8.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 92 ARGARARPWALSPGCGLVVASSGRSCLAGPTAT 190
A G R W+ S G G+V +SG+ L GP T
Sbjct: 17 AAGRPRRGWSCSRGSGVVATTSGQQTLLGPEGT 49
>UniRef50_UPI0000D9D69E Cluster: PREDICTED: similar to
beta1,4-N-acetylgalactosaminyltransferases IV; n=1;
Macaca mulatta|Rep: PREDICTED: similar to
beta1,4-N-acetylgalactosaminyltransferases IV - Macaca
mulatta
Length = 668
Score = 31.5 bits (68), Expect = 8.6
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 174 ARQERPEEATTRPHPGDRAQGRARAPRA 91
A Q+ P+ TR PG RA RA APRA
Sbjct: 410 AEQQPPKVYVTRVRPGQRASPRAPAPRA 437
>UniRef50_Q8YEE0 Cluster: OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN
OPPD; n=33; Proteobacteria|Rep: OLIGOPEPTIDE TRANSPORT
ATP-BINDING PROTEIN OPPD - Brucella melitensis
Length = 550
Score = 31.5 bits (68), Expect = 8.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 164 NGPKKPQPDHILVTEPKDEPVPLEPTSEV 78
+ P+ P H+L EPK EP +PT++V
Sbjct: 255 DNPQHPYTKHLLAAEPKGEPPLADPTTKV 283
>UniRef50_A3WCD2 Cluster: Putative uncharacterized protein; n=1;
Erythrobacter sp. NAP1|Rep: Putative uncharacterized
protein - Erythrobacter sp. NAP1
Length = 999
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 121 SVTRMWSGCGFFGPFLPCWSHGNMILTLIPSTPCLRSTCLVAVLT 255
S+ R WS G P W+ G LT++P + RS ++A LT
Sbjct: 135 SLVRRWSWASPHGNASPPWTGGTPHLTIVPESVSRRSEIVLADLT 179
>UniRef50_A0TTJ0 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 692
Score = 31.5 bits (68), Expect = 8.6
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 222 ARSTRNQGQNHVAVGPARQERPEEATTRP---HPGDRAQGRARAPRADQ 85
AR +G+ HV V AR TT P HP D R PRAD+
Sbjct: 380 ARRRAARGRPHVPVVAARAVTSNTTTTTPLEEHPDDSPDASRRRPRADR 428
>UniRef50_A5BBR4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 246
Score = 31.5 bits (68), Expect = 8.6
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 211 STPCLRS-TCLVAVLT*SLQGSPEWIMSPSTNFIDLAR*PRSLPDTTTSQPRAPXSM 378
S+P LR T +V T S+ SP+ + + +T D + PRSL + S PR+P +
Sbjct: 170 SSPSLRCRTTVVXAQTPSIDESPK-LQAKTTTPTDTVKTPRSLLSSNPSSPRSPLKL 225
>UniRef50_A0NFE5 Cluster: ENSANGP00000023517; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000023517 - Anopheles gambiae
str. PEST
Length = 430
Score = 31.5 bits (68), Expect = 8.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -1
Query: 243 YQTCASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRAD 88
+ A + R +GQ A RP+ A RPH +R GR+ RAD
Sbjct: 166 HTAAAGRERVRGERGQAAAGCARAGGGRPDAAPQRPHAAERDGGRSGTVRAD 217
>UniRef50_A4QYE9 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 217
Score = 31.5 bits (68), Expect = 8.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -1
Query: 252 QHCYQTCASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRAD 88
QH + + + R R++ H GPA E+P++ P PG +G A A R D
Sbjct: 10 QHAKRLLSKEDRHGRHKRPGHDGAGPAVGEQPKQELQVP-PGAGDRGGAGADRGD 63
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,210,873
Number of Sequences: 1657284
Number of extensions: 8308594
Number of successful extensions: 30482
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 28684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30375
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -