BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C01f
(447 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 0.99
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 0.99
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 23 1.3
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 4.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 5.3
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 21 5.3
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 5.3
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 20 9.3
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 20 9.3
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 20 9.3
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 20 9.3
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 20 9.3
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 20 9.3
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.4 bits (48), Expect = 0.99
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 378 DETENTIASTTYSETSDKL 434
DET+N + TY+E +KL
Sbjct: 340 DETKNHYSKNTYNEQGNKL 358
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.4 bits (48), Expect = 0.99
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 378 DETENTIASTTYSETSDKL 434
DET+N + TY+E +KL
Sbjct: 232 DETKNHYSKNTYNEQGNKL 250
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 23.0 bits (47), Expect = 1.3
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = -2
Query: 179 DQQGKNGPKKPQP--DHILVTEP 117
D Q +N PK+P+P D VT P
Sbjct: 322 DHQRRNEPKRPRPNIDRHEVTRP 344
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.4 bits (43), Expect = 4.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 156 EEATTRPHPGDRAQGRARAPR 94
EEA P P RA G A A R
Sbjct: 271 EEAERAPAPAVRAAGDAAAAR 291
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.0 bits (42), Expect = 5.3
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 344 QQLHNH--GHXIP**NGEHHSKHDVQRDL 424
Q ++NH GH + + +HH H Q+ +
Sbjct: 160 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 188
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.0 bits (42), Expect = 5.3
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = -2
Query: 407 RACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVL 228
R C+ V +E RG V + + K + LMI CN YV+ ++
Sbjct: 205 RLCFQVF---LEGERRGKFTVPLTPVVSEPIYDKKAMSDLMIVKLSHCNSYVDGGRNEII 261
Query: 227 L 225
L
Sbjct: 262 L 262
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.0 bits (42), Expect = 5.3
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +2
Query: 344 QQLHNH--GHXIP**NGEHHSKHDVQRDL 424
Q ++NH GH + + +HH H Q+ +
Sbjct: 162 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 190
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 20.2 bits (40), Expect = 9.3
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = +2
Query: 272 LQSGS*VHLQTSLIWHVDHAACQIQQLHN 358
L+ G + + T W++DH + HN
Sbjct: 473 LELGYRIIVSTKDAWYLDHGFWGTTEYHN 501
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 86 WSARGARARPWAL 124
WS G PWAL
Sbjct: 219 WSMSGTMLVPWAL 231
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 86 WSARGARARPWAL 124
WS G PWAL
Sbjct: 219 WSMSGTMLVPWAL 231
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 86 WSARGARARPWAL 124
WS G PWAL
Sbjct: 219 WSMSGTMLVPWAL 231
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 86 WSARGARARPWAL 124
WS G PWAL
Sbjct: 219 WSMSGTMLVPWAL 231
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 86 WSARGARARPWAL 124
WS G PWAL
Sbjct: 219 WSMSGTMLVPWAL 231
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,013
Number of Sequences: 336
Number of extensions: 2049
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -