Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301C01f
(447 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 180 6e-46
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 31 0.56
02_05_0237 + 27095817-27097433 30 0.97
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 29 1.3
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 29 1.7
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 29 1.7
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 29 1.7
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 29 1.7
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 29 2.3
01_07_0132 - 41298184-41298558,41298648-41298729,41298850-412989... 29 2.3
08_02_0478 + 17621678-17623768 28 3.0
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 28 3.9
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 28 3.9
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 28 3.9
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 28 3.9
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090 27 5.2
08_01_0346 - 3063440-3064189 27 6.9
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 27 6.9
05_07_0009 - 27015346-27015705,27016552-27016676,27016778-270168... 27 6.9
05_03_0039 - 7621613-7622695 27 6.9
04_03_0350 + 14755619-14755692,14755697-14755883,14755964-147560... 27 6.9
04_01_0360 - 4720997-4721812 27 6.9
05_03_0033 - 7585267-7586028 27 9.1
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 180 bits (437), Expect = 6e-46
Identities = 86/124 (69%), Positives = 99/124 (79%), Gaps = 1/124 (0%)
Frame = -2
Query: 446 SXRYKLIGGLAVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP 267
S RYKL+GGLAVRRACYGVLRF+ME GA+GCEV+VSGKLR QRAKSMKF DG MI SG P
Sbjct: 106 SLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYP 165
Query: 266 CNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP- 90
N Y+++A RHVLLRQGVLGIKVKIML WD +GK GP P PD + + PKDE +P
Sbjct: 166 VNLYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPL 225
Query: 89 TSEV 78
T+E+
Sbjct: 226 TAEI 229
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 30.7 bits (66), Expect = 0.56
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 168 QERPEEATTRPHPGDRAQGRARAPR 94
Q R + +T RP PG R++GR+R PR
Sbjct: 194 QLRSDYSTHRPPPGGRSRGRSRHPR 218
>02_05_0237 + 27095817-27097433
Length = 538
Score = 29.9 bits (64), Expect = 0.97
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 106 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPS 213
G+ L +V R GCG+FG + W G + L+PS
Sbjct: 152 GAHLPAVIRALVGCGWFG--IESWIGGRAVFLLLPS 185
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 231 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARA 100
A + S R G++ + P R+E + T RP PG + A A
Sbjct: 455 AERTMSLRGGGESAGSDSPCRREEAKSRTPRPQPGSAGERSAAA 498
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +3
Query: 213 YSLPEKHMSGSSVDVIIARVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTXFHDETEN 392
+ L + + GS +++ V R D +++Y+ G ++ +NN +++G HD N
Sbjct: 739 FKLNQVCIDGSRDELLETDVIRQDIKALYQSIDMGLVSEATVCFNNVSSSGLSVHDTGGN 798
Query: 393 TIASTTYSETSDKLVS 440
I ++ +S
Sbjct: 799 VIGQGDQDSEKNRYLS 814
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +2
Query: 302 TSLIWHVDHAACQIQQLHNHGHXIP**NGEHHSKH 406
T L H AA Q H HGH G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -1
Query: 231 ASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAP 97
A + R+TRN G A + RP + T + + G A AP
Sbjct: 1161 AEERRATRNAGGGAAPNKAAPKRRPRKTATNTQAAESSDGNAAAP 1205
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 29.1 bits (62), Expect = 1.7
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = -2
Query: 263 NDYVNTATRHVLLR----QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 114
++ +N H+ +R QGVL +++ + +Q +NGP+K + L+TE K
Sbjct: 359 SERINGIVNHLRIRGNPVQGVLQLEILRQIALPKQSQNGPRKSRLTISLMTEHK 412
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 221 QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 78
Q VL I+ K ++ + P P P +EP+ EP P++ S V
Sbjct: 283 QAVLAIEYKRKPEDEESSSSAPLPPPPVSTSESEPEPEPEPVKEVSPV 330
>01_07_0132 -
41298184-41298558,41298648-41298729,41298850-41298977,
41299059-41299157,41299279-41299434,41300709-41300783,
41301962-41302137,41303210-41303252,41303336-41303503,
41303584-41303731,41306316-41306587
Length = 573
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/75 (20%), Positives = 35/75 (46%)
Frame = -2
Query: 416 AVRRACYGVLRFIMEXGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATR 237
A R A G++ + + G G SG+ RGQ +++ ++G + +Y++ A
Sbjct: 472 AARLAAAGIVGILKKLGRDGSGAASSGRGRGQPRRTVVAIEGGLYQGYPVFREYLDEALV 531
Query: 236 HVLLRQGVLGIKVKI 192
+L + + +++
Sbjct: 532 EILGEEVARNVTLRV 546
>08_02_0478 + 17621678-17623768
Length = 696
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -2
Query: 305 KFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 210
K + GL+IHSG ND+V+++ + + G++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGII 452
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 33 DSGDRLRQRRGREGAHFAGRLEGHGLVLG 119
+ GD+ + +G EG +G GHG V+G
Sbjct: 164 EEGDKGMKVKGEEGCRASGSDSGHGCVIG 192
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 121 SVTRMWSGCGFFGPFLPCWSH 183
S T M S CGF G CW+H
Sbjct: 211 SSTGMQSNCGFEGQVNACWTH 231
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = -1
Query: 240 QTCASQARSTRNQGQNHVAVGPARQERPEEATTR-PHPGDRAQGRARAPRADQ 85
Q C + +HV P ++ RP + +R P R R RA R +Q
Sbjct: 861 QPCNDKLEENEKADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQ 913
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 158 PKKPQPDHILVTEPKDEPVPLEPTS 84
P+ +PD +LV P P PL P +
Sbjct: 129 PRADEPDVVLVLPPSQRPPPLSPAA 153
>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
Length = 1037
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 272 LQSGS*VHLQTSLIWHVDHAACQIQQLHNHGH 367
+QSG+ LIWH+ + C+I+ H H
Sbjct: 753 IQSGAPRCSHVILIWHIATSLCEIKLAQEHDH 784
>08_01_0346 - 3063440-3064189
Length = 249
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 431 LIGGLAVRRACYGVLR 384
L+GG A ACYGVLR
Sbjct: 228 LLGGWAAMAACYGVLR 243
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -2
Query: 260 DYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 81
+YV A V + VL I+ K +++ + P P+P+ EP+ EPV E E
Sbjct: 287 EYVTEAPT-VAQKDKVLAIEYKKEAEEEEKPASPPPAPEPEPEQEPEPEPEPVKEEAPKE 345
>05_07_0009 -
27015346-27015705,27016552-27016676,27016778-27016853,
27016923-27017105,27018000-27018077,27018159-27018239,
27018347-27018412,27018491-27018556,27019126-27019176,
27019286-27019378,27019498-27019625,27019713-27019851,
27021039-27021136,27021332-27021401,27021565-27021654
Length = 567
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -2
Query: 260 DYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 81
+YV A R V +R+ L + +++L + + + P P P +EPVP+ P +E
Sbjct: 305 EYVREAPRMVPVREP-LELPERLLLTYKPEEQEEDSVPDPVEE-EKPPVEEPVPVPPVTE 362
Query: 80 VRS 72
S
Sbjct: 363 AVS 365
>05_03_0039 - 7621613-7622695
Length = 360
Score = 27.1 bits (57), Expect = 6.9
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 185 PWDQQGKNGPK-KPQPDHILVTEPKDEPVPLEP 90
P + + K PK KP P H EPK EP P EP
Sbjct: 53 PPELEPKPKPKPKPHPKHESKPEPKPEPKP-EP 84
>04_03_0350 +
14755619-14755692,14755697-14755883,14755964-14756072,
14756157-14756379,14756716-14756794,14757222-14757273,
14757354-14757416,14757519-14757616,14757970-14758031,
14758066-14758159,14758430-14758509,14758617-14758686,
14758807-14758864,14758973-14759037,14759127-14759221,
14759318-14759402
Length = 497
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 145 CGFFGPFLPCWSHGNMILTLIPSTPCLRSTCLVAVLT*SLQGSPEW 282
C F P P H ++ L+PS C T +A L G P++
Sbjct: 314 CYRFSPEFPVIIHNELMFLLLPSCSCFDYTNGLADLVVGYMGVPKY 359
>04_01_0360 - 4720997-4721812
Length = 271
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 33 DSGDRLRQRRGREGAHFAGRLEGHGL 110
D G R RQR G G A R +G GL
Sbjct: 168 DGGRRRRQRDGEAGVEAAARGDGDGL 193
>05_03_0033 - 7585267-7586028
Length = 253
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 173 QGKNGPK-KPQPDHILVTEPKDEPVPLEPTSE 81
+ K+ PK +P+P L EPK EP EP SE
Sbjct: 128 EAKSEPKSEPKPKSELYAEPKSEP-KSEPQSE 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,450,588
Number of Sequences: 37544
Number of extensions: 245476
Number of successful extensions: 979
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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