Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301B11f
(426 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 117 4e-27
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 52 2e-07
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 52 2e-07
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 50 5e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 50 9e-07
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 46 1e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 46 1e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 45 2e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 45 2e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 45 2e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 43 1e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 43 1e-04
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 42 1e-04
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 41 4e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 7e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 7e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 40 0.001
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 40 0.001
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 40 0.001
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 40 0.001
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.002
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 38 0.003
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 36 0.012
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 36 0.012
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 35 0.021
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 35 0.028
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 34 0.037
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 34 0.037
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 34 0.037
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 34 0.049
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 34 0.049
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 34 0.049
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 33 0.065
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 33 0.065
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 33 0.086
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 33 0.086
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 32 0.15
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 0.26
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 0.26
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 31 0.35
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 30 0.60
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 30 0.60
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 30 0.60
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 29 1.1
Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 1.4
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 29 1.4
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 29 1.4
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 29 1.8
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical pr... 28 3.2
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 3.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 3.2
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 28 3.2
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 27 4.3
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 27 5.6
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 27 5.6
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 27 5.6
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 27 5.6
Z70312-2|CAA94386.2| 396|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical p... 27 7.4
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 27 7.4
Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 27 7.4
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 27 7.4
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 27 7.4
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 27 7.4
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 26 9.8
AL161712-13|CAC70137.1| 830|Caenorhabditis elegans Hypothetical... 26 9.8
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 26 9.8
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 117 bits (281), Expect = 4e-27
Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 14/150 (9%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVK 171
ES T LI+NY+P+ MTQ+ + SLF+++G++ESCKL+ ++ GYGFV Y R +DA++
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 172 ARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG 351
A +FNGL +QNKT+KVS+A +P NLY+ +P +TL +L +F FG
Sbjct: 99 AVSSFNGLRLQNKTIKVSYA------RPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFG 152
Query: 352 RIINSRI--------AAGIAFVLYEHQYEA 417
+II SRI + G+ FV ++ + EA
Sbjct: 153 QIITSRILSDNVTGLSKGVGFVRFDKKDEA 182
Score = 33.9 bits (74), Expect = 0.049
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDAVKARK 180
+ L V+ IP+ MT + S+F G++ + +++++ +G GFV + + D+A A K
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIK 187
Query: 181 AFNG 192
NG
Sbjct: 188 TLNG 191
Score = 31.9 bits (69), Expect = 0.20
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +1
Query: 64 MMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 222
+++ LFS G + + K++ + +GY FV + +A A + NG + KTL+V
Sbjct: 389 LLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +1
Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYE 414
P A + L++ NL ++ L LF+QFG I+N +I G AFV + E
Sbjct: 367 PPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTE 426
Query: 415 AXRA 426
A A
Sbjct: 427 AYNA 430
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 54.8 bits (126), Expect = 2e-08
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI---ANRGYGFVEYTRPDDAVKARK 180
+ P L V + +T+D + +LF+ +G + K+I +N Y FVE++ A +A +
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQ 102
Query: 181 AFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
N L+ ++ +KV+ A+ + + +++++ +L +E+ Q L F FG +
Sbjct: 103 TMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVS 162
Query: 361 NSRI--------AAGIAFVLYEHQYEAXRA 426
++++ + G FV Y + EA RA
Sbjct: 163 DAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Score = 43.6 bits (98), Expect = 6e-05
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 279
++GYGFV Y + ++A +A + NG + +T++ + A P + KP E +
Sbjct: 175 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 234
Query: 280 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
++Y+ N+ + LT ++ FA FGRI RI G AFV ++++ A +A
Sbjct: 235 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 291
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 52 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 174
+T+D + F++ G++ ++ +GY FV++ D A KA
Sbjct: 251 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 291
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 51.6 bits (118), Expect = 2e-07
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
+ + + +V+ ++ FS G + SCK+ + +GYGFV + + A A + N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 190 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 357
G+L+ K + V A N EL K N+Y+ N + + L LFA+FG I
Sbjct: 119 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKLFAKFGNI 176
Query: 358 INSRI------AAGIAFVLYEHQYEAXRA 426
+ + + G FV + + EA A
Sbjct: 177 TSCEVMTVEGKSKGFGFVAFANPEEAETA 205
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 51.6 bits (118), Expect = 2e-07
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
+ + + +V+ ++ FS G + SCK+ + +GYGFV + + A A + N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 190 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 357
G+L+ K + V A N EL K N+Y+ N + + L LFA+FG I
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKLFAKFGNI 239
Query: 358 INSRI------AAGIAFVLYEHQYEAXRA 426
+ + + G FV + + EA A
Sbjct: 240 TSCEVMTVEGKSKGFGFVAFANPEEAETA 268
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 50.4 bits (115), Expect = 5e-07
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
+ + + +V+ ++ FS G + SCK+ + +GYGFV + + A A + N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 190 GLLMQNKTLKVS----HALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI 357
G+L+ K + V A N EL K N+Y+ N + + L +FA+FG I
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFT--NVYVKNFGDHYNKETLEKVFAKFGNI 239
Query: 358 INSRI------AAGIAFVLYEHQYEAXRA 426
+ + + G FV + + EA A
Sbjct: 240 TSCEVMTVEGKSKGFGFVAFANPEEAETA 268
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.6 bits (113), Expect = 9e-07
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI---ANRGYGFVEYTRPDDAVKARK 180
E P L V + +T + + +LF+ +G + K+I N Y FVE++ + A A +
Sbjct: 37 EDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQ 96
Query: 181 AFNGLLMQNKTLKVSHALLNPEL-KPPTKPEAD--WNLYICNLPNELTLQDLHGLFAQFG 351
+ NG + K + V+ A E + +KPE +++++ +L +E+ L F +FG
Sbjct: 97 SHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFG 156
Query: 352 RIINSRI--------AAGIAFVLYEHQYEAXRA 426
+ ++I G FV Y + +A RA
Sbjct: 157 EVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +1
Query: 79 FSTMGKLESCKLIAN------RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLN 240
F G++ K+I + +GYGFV Y R +DA +A NG + +T++ + A
Sbjct: 152 FVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRK 211
Query: 241 PE 246
P+
Sbjct: 212 PD 213
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 47.6 bits (108), Expect = 4e-06
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDD 162
GP ++ V +IP + +D + LF GK+ +L+ A+RGY FV Y +D
Sbjct: 194 GPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKED 253
Query: 163 AVKARKAFNG-LLMQNKTLKVSHALLNPEL 249
A A K ++G + K LKV+ ++ N L
Sbjct: 254 AAAAAKTYDGHEISTGKPLKVNVSIANTRL 283
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQ 204
L + I E +T++ + LF L+ K + + Y F+ + DD +KA + +NG ++
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKV--KDYAFIHFNERDDCLKAMEEWNGKELE 436
Query: 205 NKTLKVSHALLNPELKPPTKP 267
++ S L P + KP
Sbjct: 437 GTVVEAS--LAKPPQEKKKKP 455
Score = 27.9 bits (59), Expect = 3.2
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +1
Query: 115 IANRGYGFVEYTRPDDA--VKARKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLY 288
I NRG+ FV++ A +K + A + + N + V A E T + LY
Sbjct: 322 IKNRGFCFVDFIDHKTASDIKRKIAQHKIRPFNADVYVDWAEHQEEPDEDTMSKVKV-LY 380
Query: 289 ICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
I N+ +T + L+ LF ++ + + AF+ + + + +A
Sbjct: 381 IRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKA 426
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 45.6 bits (103), Expect = 1e-05
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Frame = +1
Query: 13 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 174
S T L + + D++ + S G + S K I ++ GYGFV++ P A A
Sbjct: 105 SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 164
Query: 175 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
N + ++ A L + + PT NLYI NLP + T Q L +FG
Sbjct: 165 VDGLN-----TEGVQAQMAKLQQQEQDPT------NLYIANLPLDFTEQMLETELNKFGM 213
Query: 355 IINSRI 372
+I++RI
Sbjct: 214 VISTRI 219
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 45.6 bits (103), Expect = 1e-05
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Frame = +1
Query: 13 SPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 174
S T L + + D++ + S G + S K I ++ GYGFV++ P A A
Sbjct: 79 SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 138
Query: 175 RKAFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
N + ++ A L + + PT NLYI NLP + T Q L +FG
Sbjct: 139 VDGLN-----TEGVQAQMAKLQQQEQDPT------NLYIANLPLDFTEQMLETELNKFGM 187
Query: 355 IINSRI 372
+I++RI
Sbjct: 188 VISTRI 193
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 45.6 bits (103), Expect = 1e-05
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKAR 177
+ P +L V+ IP + + ++F +G + ++I N +G+GFV PDDA +AR
Sbjct: 97 DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRAR 156
Query: 178 KAFNGLLMQNKTLKVSHA 231
FNG ++ + ++V+ A
Sbjct: 157 AEFNGTTIEGRRVEVNLA 174
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 45.6 bits (103), Expect = 1e-05
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKAR 177
+ P +L V+ IP + + ++F +G + ++I N +G+GFV PDDA +AR
Sbjct: 97 DGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRAR 156
Query: 178 KAFNGLLMQNKTLKVSHA 231
FNG ++ + ++V+ A
Sbjct: 157 AEFNGTTIEGRRVEVNLA 174
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
+++ V I + +DM+ F G ++S + ++ + FVEY P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 181 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 321
+ NG ++ + LKV+ + P+ P +P D + +Y+ ++ +L+
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 322 DLHGLFAQFGRIINSRIA 375
DL +F FG I+ ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
+++ V I + +DM+ F G ++S + ++ + FVEY P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 181 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 321
+ NG ++ + LKV+ + P+ P +P D + +Y+ ++ +L+
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 322 DLHGLFAQFGRIINSRIA 375
DL +F FG I+ ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
+++ V I + +DM+ F G ++S + ++ + FVEY P+ A+ A++
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 181 AFNGLLMQNKTLKVSHALLN----PELKPPTKPEAD---------WNLYICNLPNELTLQ 321
+ NG ++ + LKV+ + P+ P +P D + +Y+ ++ +L+
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 322 DLHGLFAQFGRIINSRIA 375
DL +F FG I+ ++A
Sbjct: 222 DLKSVFEAFGEIVKCQLA 239
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 44.0 bits (99), Expect = 5e-05
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
+ + + V+ ++ FS G + SCK+ + +GYGFV + A A + N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 190 GLLMQNKTLKVSHALLNPE-LKPPTKPEADW-NLYICNLPNELTLQDLHGLFAQFGRIIN 363
G+L+ +K + V + +K + + N+++ N L + L +F++FG I +
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 364 SRIAA-------GIAFVLYEHQYEAXRA 426
+ + G FV + Q A +A
Sbjct: 267 AVVMTDAQGKPKGFGFVAFADQDAAGQA 294
Score = 38.3 bits (85), Expect = 0.002
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKA 183
T + V E + Q+ + ++FS G++ S ++ + +G+GFV + D A +A +
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 184 FNGLLMQNKTLKVS------HALLNPELK---PPTKPEA-----DWNLYICNLPNELTLQ 321
N +++ K+S + + ELK K E NLY+ N+ +L
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 322 DLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAXRA 426
L F+ FG I ++++ + G FV +E EA A
Sbjct: 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAA 399
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 44.0 bits (99), Expect = 5e-05
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKAFN 189
+ + + V+ ++ FS G + SCK+ + +GYGFV + A A + N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 190 GLLMQNKTLKVSHALLNPE-LKPPTKPEADW-NLYICNLPNELTLQDLHGLFAQFGRIIN 363
G+L+ +K + V + +K + + N+++ N L + L +F++FG I +
Sbjct: 207 GMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITS 266
Query: 364 SRIAA-------GIAFVLYEHQYEAXRA 426
+ + G FV + Q A +A
Sbjct: 267 AVVMTDAQGKPKGFGFVAFADQDAAGQA 294
Score = 38.3 bits (85), Expect = 0.002
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARKA 183
T + V E + Q+ + ++FS G++ S ++ + +G+GFV + D A +A +
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 184 FNGLLMQNKTLKVS------HALLNPELK---PPTKPEA-----DWNLYICNLPNELTLQ 321
N +++ K+S + + ELK K E NLY+ N+ +L
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 322 DLHGLFAQFGRIINSRI-------AAGIAFVLYEHQYEAXRA 426
L F+ FG I ++++ + G FV +E EA A
Sbjct: 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAA 399
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 43.6 bits (98), Expect = 6e-05
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 279
++GYGFV Y + ++A +A + NG + +T++ + A P + KP E +
Sbjct: 62 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 121
Query: 280 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
++Y+ N+ + LT ++ FA FGRI RI G AFV ++++ A +A
Sbjct: 122 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 178
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 52 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 174
+T+D + F++ G++ ++ +GY FV++ D A KA
Sbjct: 138 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 178
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 43.6 bits (98), Expect = 6e-05
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 279
++GYGFV Y + ++A +A + NG + +T++ + A P + KP E +
Sbjct: 72 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 131
Query: 280 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
++Y+ N+ + LT ++ FA FGRI RI G AFV ++++ A +A
Sbjct: 132 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 188
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 52 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 174
+T+D + F++ G++ ++ +GY FV++ D A KA
Sbjct: 148 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 188
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 43.6 bits (98), Expect = 6e-05
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNP--ELKPPTKPEADW----- 279
++GYGFV Y + ++A +A + NG + +T++ + A P + KP E +
Sbjct: 143 SKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 202
Query: 280 -------NLYICNLPNELTLQDLHGLFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
++Y+ N+ + LT ++ FA FGRI RI G AFV ++++ A +A
Sbjct: 203 QTSGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 259
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 52 MTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKA 174
+T+D + F++ G++ ++ +GY FV++ D A KA
Sbjct: 219 LTEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKA 259
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAV 168
GP+ P +L V+ IP + ++F G + ++I N +G+GFV RP DA
Sbjct: 148 GPD-GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAE 206
Query: 169 KARKAFNGLLMQNKTLKVSHA 231
+AR+ +G +++ + ++V+ A
Sbjct: 207 RARQELHGSMIEGRKIEVNCA 227
Score = 33.5 bits (73), Expect = 0.065
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 223 SHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG------RIINSRIAAGI 384
S A+ P+ + P+ L++ N+P DL +F +FG I N R + G
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194
Query: 385 AFVLYEHQYEAXRA 426
FV E +A RA
Sbjct: 195 GFVTMERPQDAERA 208
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAV 168
GP+ P +L V+ IP + ++F G + ++I N +G+GFV RP DA
Sbjct: 148 GPD-GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAE 206
Query: 169 KARKAFNGLLMQNKTLKVSHA 231
+AR+ +G +++ + ++V+ A
Sbjct: 207 RARQELHGSMIEGRKIEVNCA 227
Score = 33.5 bits (73), Expect = 0.065
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 223 SHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFG------RIINSRIAAGI 384
S A+ P+ + P+ L++ N+P DL +F +FG I N R + G
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194
Query: 385 AFVLYEHQYEAXRA 426
FV E +A RA
Sbjct: 195 GFVTMERPQDAERA 208
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 42.3 bits (95), Expect = 1e-04
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +1
Query: 28 IVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLLMQN 207
I N ++T+D + LF GK+ + A +G+GFV++ A ++ ++ NG+ +
Sbjct: 87 IGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNGMSWKA 146
Query: 208 KTLKVSHALLNPELKPPTKPE 270
L V A+L L+ PT E
Sbjct: 147 CCLDVHLAMLG-SLRKPTGNE 166
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Frame = +1
Query: 265 PEADWNLYICNLPNELTLQDLHGLFAQFG-----RIINSRIAAGIAFVLYEHQYEAXRA 426
PE + LYI NLP ++T ++++ +F +FG R+ N+ G AFV+YE ++A A
Sbjct: 15 PEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTA 73
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 40.7 bits (91), Expect = 4e-04
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKA 183
KL V IP + + + LF GK+ ++ ++ G F+ Y D AV+ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 184 FNG---LLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
+ L N+ ++V A + P D L+I L + + ++ LFA FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 355 IINSRI-------AAGIAFVLYEHQYEAXRA 426
+ + + G AFV Y+H +A A
Sbjct: 150 LDEVTVLRGADGASKGCAFVKYKHGLDAHMA 180
Score = 31.5 bits (68), Expect = 0.26
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDDAVKARKAF 186
L + ++P+ + +F+ G + S K+ +R +GFV Y + A A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 187 NGLLMQNKTLKVSHALLNPELKP 255
NG + K LKV E +P
Sbjct: 491 NGFQIGMKRLKVQLKRPRNESRP 513
Score = 30.3 bits (65), Expect = 0.60
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Frame = +1
Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQY 411
P K L++ +P L +DL LF QFG+I I G AF+ Y H+
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 412 EAXR 423
A R
Sbjct: 82 SAVR 85
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP E +L +FA FG I+++++
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 40.7 bits (91), Expect = 4e-04
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 16/151 (10%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKA 183
KL V IP + + + LF GK+ ++ ++ G F+ Y D AV+ +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 184 FNG---LLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGR 354
+ L N+ ++V A + P D L+I L + + ++ LFA FG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 355 IINSRI-------AAGIAFVLYEHQYEAXRA 426
+ + + G AFV Y+H +A A
Sbjct: 150 LDEVTVLRGADGASKGCAFVKYKHGLDAHMA 180
Score = 31.5 bits (68), Expect = 0.26
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDDAVKARKAF 186
L + ++P+ + +F+ G + S K+ +R +GFV Y + A A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 187 NGLLMQNKTLKVSHALLNPELKP 255
NG + K LKV E +P
Sbjct: 491 NGFQIGMKRLKVQLKRPRNESRP 513
Score = 30.3 bits (65), Expect = 0.60
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Frame = +1
Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQY 411
P K L++ +P L +DL LF QFG+I I G AF+ Y H+
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 412 EAXR 423
A R
Sbjct: 82 SAVR 85
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP E +L +FA FG I+++++
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 39.9 bits (89), Expect = 7e-04
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDAVKARKAF 186
+ V + + ++ +++ S F+ G++ K+I + +GYGFV + +A A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 187 NGLLMQNKTLKVSHA-----------LLNPELKPPTKPEADWNLYICNLPNELTLQDLHG 333
NG + + ++ + A L ++ TK + + ++Y+ N+ + T DL
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKAD-NTSVYVGNISQQTTDADLRD 255
Query: 334 LFAQFGRIINSRI--AAGIAFVLYEHQYEAXRA 426
LF+ +G I RI AFV YE + A +A
Sbjct: 256 LFSTYGDIAEVRIFKTQRYAFVRYEKKECATKA 288
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYGFVEYTRPDDAVKARKAFNGLL 198
T + V I + T + LFST G + ++ + Y FV Y + + A KA NG
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKE 296
Query: 199 MQNKTLKVS 225
M ++ S
Sbjct: 297 MAGNQVRCS 305
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.9 bits (89), Expect = 7e-04
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
P+ K+ V IP + LF G + SC ++ A++G FV + DA
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
++A+ A + + KV + +P ++KP T+ + L+I L + ++L +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 340 AQFGRI 357
A+FG I
Sbjct: 163 AKFGHI 168
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552
Query: 163 AVKARKAFNGLLMQNKTLKV 222
A A A NG + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP + DL FA FG I+++++
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.9 bits (89), Expect = 7e-04
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
P+ K+ V IP + LF G + SC ++ A++G FV + DA
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
++A+ A + + KV + +P ++KP T+ + L+I L + ++L +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 340 AQFGRI 357
A+FG I
Sbjct: 163 AKFGHI 168
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552
Query: 163 AVKARKAFNGLLMQNKTLKV 222
A A A NG + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP + DL FA FG I+++++
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.9 bits (89), Expect = 7e-04
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
P+ K+ V IP + LF G + SC ++ A++G FV + DA
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
++A+ A + + KV + +P ++KP T+ + L+I L + ++L +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 340 AQFGRI 357
A+FG I
Sbjct: 163 AKFGHI 168
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 424 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 481
Query: 163 AVKARKAFNGLLMQNKTLKV 222
A A A NG + +K LKV
Sbjct: 482 ATNAISAMNGFQIGSKRLKV 501
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP + DL FA FG I+++++
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 459
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.9 bits (89), Expect = 7e-04
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
P+ K+ V IP + LF G + SC ++ A++G FV + DA
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
++A+ A + + KV + +P ++KP T+ + L+I L + ++L +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 340 AQFGRI 357
A+FG I
Sbjct: 163 AKFGHI 168
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.9 bits (89), Expect = 7e-04
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
P+ K+ V IP + LF G + SC ++ A++G FV + DA
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
++A+ A + + KV + +P ++KP T+ + L+I L + ++L +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 340 AQFGRI 357
A+FG I
Sbjct: 163 AKFGHI 168
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.9 bits (89), Expect = 7e-04
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
P+ K+ V IP + LF G + SC ++ A++G FV + DA
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
++A+ A + + KV + +P ++KP T+ + L+I L + ++L +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 340 AQFGRI 357
A+FG I
Sbjct: 163 AKFGHI 168
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.9 bits (89), Expect = 7e-04
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDA 165
P+ K+ V IP + LF G + SC ++ A++G FV + DA
Sbjct: 50 PDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDA 109
Query: 166 VKARKAFNGLLMQNKTLKVSHALLNP-ELKPP-TKPEADWNLYICNLPNELTLQDLHGLF 339
++A+ A + + KV + +P ++KP T+ + L+I L + ++L +F
Sbjct: 110 IEAQGALHNI-------KVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 340 AQFGRI 357
A+FG I
Sbjct: 163 AKFGHI 168
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 495 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 552
Query: 163 AVKARKAFNGLLMQNKTLKV 222
A A A NG + +K LKV
Sbjct: 553 ATNAISAMNGFQIGSKRLKV 572
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP + DL FA FG I+++++
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 530
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 39.5 bits (88), Expect = 0.001
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Frame = +1
Query: 127 GYGFVEYTRPDDAVKARKAFNGLLMQNKT--LKVSH-------ALLNPELKPPTKPEADW 279
G+GFV++ DA A K G L+ + LK+SH AL E+K + E
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECT- 748
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
L + NLP E +++++ LF FG + RI
Sbjct: 749 KLLVRNLPFEASVKEVETLFETFGAVKTIRI 779
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Frame = +1
Query: 19 TKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-------NRGYGFVEYTRPDDAVKA 174
TKL+V +P + + +LF T G +++ ++ +RG+GFV++ D+A +A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA 174
+S K+ + +P +T+D + L + G L++ L + +GY F EY P +A
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQA 347
Query: 175 RKAFNGLLMQNKTLKVSHALLNPE 246
NG+ + +K L V A N +
Sbjct: 348 IAGLNGMQLGDKQLVVQLACANQQ 371
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA 174
+S K+ + +P +T+D + L + G L++ L + +GY F EY P +A
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQA 347
Query: 175 RKAFNGLLMQNKTLKVSHALLNPE 246
NG+ + +K L V A N +
Sbjct: 348 IAGLNGMQLGDKQLVVQLACANQQ 371
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA 174
+S K+ + +P +T+D + L + G L++ L + +GY F EY P +A
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQA 322
Query: 175 RKAFNGLLMQNKTLKVSHALLNPE 246
NG+ + +K L V A N +
Sbjct: 323 IAGLNGMQLGDKQLVVQLACANQQ 346
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKA 174
+S K+ + +P +T+D + L + G L++ L + +GY F EY P +A
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQA 325
Query: 175 RKAFNGLLMQNKTLKVSHALLNPE 246
NG+ + +K L V A N +
Sbjct: 326 IAGLNGMQLGDKQLVVQLACANQQ 349
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Frame = +1
Query: 76 LFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVSHA 231
+F +G + ++I N +G+GFV PDDA +AR FNG ++ + ++V+ A
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.3 bits (85), Expect = 0.002
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
+ V + E +++ +++ L G + S + +R G+GFVE+ +DA A K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 187 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
N + + K +KV+ A + + + N+++ NL E+ + L+ F+ FG I+
Sbjct: 75 NMIKLYGKPIKVNKASAHEK-----NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.3 bits (85), Expect = 0.002
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
+ V + E +++ +++ L G + S + +R G+GFVE+ +DA A K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 187 NGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
N + + K +KV+ A + + + N+++ NL E+ + L+ F+ FG I+
Sbjct: 85 NMIKLYGKPIKVNKASAHEK-----NMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 137
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 37.9 bits (84), Expect = 0.003
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDD 162
G + S + V I +++D + S+FS G + S K++ +R GYGF+E+
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQT 71
Query: 163 AVKARKAFNGLLMQNKTLKVSHA 231
A A + NG + + L+V A
Sbjct: 72 AEVAIRNLNGYELSGRILRVDSA 94
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.012
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Frame = +1
Query: 22 KLIVNYI-PEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
K+ V I PEV +D+ S F+ G++ ++ +RG+ FVE+T + A
Sbjct: 30 KIFVGGISPEVNNEDLS-SHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-- 86
Query: 181 AFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
L + +T+K E+KP K + +++ LP++ + QDL F QFG++
Sbjct: 87 ----LAAREQTIKGKSV----EVKP-AKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVD 137
Query: 361 N--------SRIAAGIAFVLYEHQYEAXRA 426
+ ++ AF+++E + A +A
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 35.9 bits (79), Expect = 0.012
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Frame = +1
Query: 22 KLIVNYI-PEVMTQDMMFSLFSTMGKLESCKLI------ANRGYGFVEYTRPDDAVKARK 180
K+ V I PEV +D+ S F+ G++ ++ +RG+ FVE+T + A
Sbjct: 30 KIFVGGISPEVNNEDLS-SHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA-- 86
Query: 181 AFNGLLMQNKTLKVSHALLNPELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
L + +T+K E+KP K + +++ LP++ + QDL F QFG++
Sbjct: 87 ----LAAREQTIKGKSV----EVKP-AKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVD 137
Query: 361 N--------SRIAAGIAFVLYEHQYEAXRA 426
+ ++ AF+++E + A +A
Sbjct: 138 DIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 35.1 bits (77), Expect = 0.021
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +1
Query: 31 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 192
V P T+D + + FS G + + +++ +R G+ FVE+T A +A FNG
Sbjct: 8 VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67
Query: 193 LLMQNKTLKVSHA 231
+ + L+V+ A
Sbjct: 68 VDFNGRALRVNLA 80
Score = 29.9 bits (64), Expect = 0.80
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Frame = +1
Query: 277 WNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA--------GIAFVLYEHQYEAXRA 426
+++Y+ N P + T DL F+Q G + N RI G AFV + + A RA
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 34.7 bits (76), Expect = 0.028
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +1
Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRI--------AAGIAFVLYEHQY 411
P + W +++ N+ E T D+H F+++G+I N + G A V YE Q
Sbjct: 48 PQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQK 107
Query: 412 EAXRA 426
EA A
Sbjct: 108 EANEA 112
Score = 27.5 bits (58), Expect = 4.3
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
+ V I E T+D + FS GK+++ L +R GY VEY +A +A
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 187 NGLLMQNKTLKV 222
N + + +KV
Sbjct: 117 NDTDLLGQNVKV 128
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 34.3 bits (75), Expect = 0.037
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 274 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAXRA 426
D +Y+ LP++ T Q+L +F +FGRI +R G AFV Y+ +A A
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDA 55
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 34.3 bits (75), Expect = 0.037
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 274 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAXRA 426
D +Y+ LP++ T Q+L +F +FGRI +R G AFV Y+ +A A
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDA 55
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 34.3 bits (75), Expect = 0.037
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 274 DWNLYICNLPNELTLQDLHGLFAQFGRIIN---SRIAAGIAFVLYEHQYEAXRA 426
D +Y+ LP++ T Q+L +F +FGRI +R G AFV Y+ +A A
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDA 55
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 33.9 bits (74), Expect = 0.049
Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +1
Query: 31 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 192
V +P T++ + + F+ +G + + +++ +R G+ FVE++ A +A + NG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 193 LLMQNKTLKVSHA 231
+ + L+V++A
Sbjct: 70 VAFNGRNLRVNYA 82
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.049
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-----NRGYGFVEYTRPDDAVKA 174
+ PT ++V + + + M+ +F + G++E L NRG+ + + DDA K+
Sbjct: 124 KGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKS 183
Query: 175 RKAFNGLLMQNKTLKVS 225
+ N + + +++S
Sbjct: 184 CEQLNNFELAGRCIRLS 200
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 33.9 bits (74), Expect = 0.049
Identities = 17/77 (22%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +1
Query: 10 ESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIA-----NRGYGFVEYTRPDDAVKA 174
+ PT ++V + + + M+ +F + G++E L NRG+ + + DDA K+
Sbjct: 269 KGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKS 328
Query: 175 RKAFNGLLMQNKTLKVS 225
+ N + + +++S
Sbjct: 329 CEQLNNFELAGRCIRLS 345
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 33.5 bits (73), Expect = 0.065
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +1
Query: 31 VNYIPEVMTQDMMFSLFSTMGKLESCKLI--ANRG---YGFVEYTRPDDAVKARKAFN-- 189
+ IP+ +F +F GK+ C+++ +N G GFV DA + RK N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 190 GLLMQNKTLKVS-HALLNPELKP 255
L+ +N TLKV+ H + L P
Sbjct: 77 NLIGENFTLKVTDHKNVGGSLLP 99
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 33.5 bits (73), Expect = 0.065
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +1
Query: 31 VNYIPEVMTQDMMFSLFSTMGKLESCKLI--ANRG---YGFVEYTRPDDAVKARKAFN-- 189
+ IP+ +F +F GK+ C+++ +N G GFV DA + RK N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 190 GLLMQNKTLKVS-HALLNPELKP 255
L+ +N TLKV+ H + L P
Sbjct: 77 NLIGENFTLKVTDHKNVGGSLLP 99
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 33.1 bits (72), Expect = 0.086
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 31 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 192
V P T++ + + FS++G++ + +++ +R G+ F+E+ A +A + NG
Sbjct: 9 VGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNG 68
Query: 193 LLMQNKTLKVSHA 231
+ L+V+ A
Sbjct: 69 AEFNGRPLRVNLA 81
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 33.1 bits (72), Expect = 0.086
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = +1
Query: 289 ICNLPNELTLQDLHGLFAQFGRIINSRIA--------AGIAFVLYEHQYEAXRA 426
+ NLP E+ +L LF + GR+I IA G AFV +E + +A RA
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARA 233
Score = 32.3 bits (70), Expect = 0.15
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +1
Query: 31 VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNG 192
V +P+ M +D + LF +G++ + ++ G+ FV + DDA +A N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 193 LLMQNKTLKV 222
+ M + LKV
Sbjct: 240 IRMYHMVLKV 249
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 32.3 bits (70), Expect = 0.15
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 1 GPEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG------YGFVEYTRPDD 162
GP+ + L + ++P+ + + F+ G + S K+ ++ +GFV Y
Sbjct: 331 GPDGA--NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQS 388
Query: 163 AVKARKAFNGLLMQNKTLKV 222
A A A NG + +K LKV
Sbjct: 389 ATNAISAMNGFQIGSKRLKV 408
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP + DL FA FG I+++++
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 366
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.26
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFN 189
++ V+ IP + + ++F G++ S +++ N +G+GFV + KAR A +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 190 GLLMQNKTLKVSHA 231
+Q + ++V A
Sbjct: 112 ESHVQGRIIEVRRA 125
Score = 31.1 bits (67), Expect = 0.35
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 247 LKPPTKPEA---DWNLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
+KP T+ A D +Y+ N+P QDL +F +GR+++ I
Sbjct: 38 VKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEI 82
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.26
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN----RGYGFVEYTRPDDAVKARKAFN 189
++ V+ IP + + ++F G++ S +++ N +G+GFV + KAR A +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 190 GLLMQNKTLKVSHA 231
+Q + ++V A
Sbjct: 112 ESHVQGRIIEVRRA 125
Score = 31.1 bits (67), Expect = 0.35
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 247 LKPPTKPEA---DWNLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
+KP T+ A D +Y+ N+P QDL +F +GR+++ I
Sbjct: 38 VKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEI 82
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 31.1 bits (67), Expect = 0.35
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 4 PEESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN------RGYGFVEYTRPDDA 165
P L V E +T+ ++ + F G + + + + RG+GFVE+ +DA
Sbjct: 6 PHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDA 65
Query: 166 VKARKAFNGLLMQNKTLKVSHA 231
A N + KT++V+ A
Sbjct: 66 AMAIDNMNESELFGKTIRVNFA 87
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 30.3 bits (65), Expect = 0.60
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI----INSRIAAGIAFVLYEHQYEAXR 423
P D +Y+ NLP ++ +++ +F ++GRI I S AFV +E +A
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAED 61
Query: 424 A 426
A
Sbjct: 62 A 62
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 30.3 bits (65), Expect = 0.60
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 256 PTKPEADWNLYICNLPNELTLQDLHGLFAQFGRI----INSRIAAGIAFVLYEHQYEAXR 423
P D +Y+ NLP ++ +++ +F ++GRI I S AFV +E +A
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAED 61
Query: 424 A 426
A
Sbjct: 62 A 62
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 30.3 bits (65), Expect = 0.60
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKV 222
++GYGFV + +D V+A + +G + N+ +K+
Sbjct: 243 SKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKL 276
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 121 NRGYGFVEYTRPDDAVKARKAFNG 192
+RGYG+VEY +DA K+ K +G
Sbjct: 174 HRGYGYVEYDNLEDAEKSIKHMDG 197
>Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical
protein W02A2.6 protein.
Length = 781
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 136 FVEYTRPDDAVKARKAFNGLLMQNKTLKV 222
F E+T D KA AF GLL+ K +KV
Sbjct: 732 FNEFTADHDRKKAATAFEGLLLSLKNMKV 760
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
+YI LPN + +D+ F +G++ + + G FV ++ Q +A A
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDA 51
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 244 ELKPPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRII 360
E+KP P + +Y+ N E+ + L LF Q G ++
Sbjct: 2 EIKPTPSPPEERTIYVANFSEEVDEELLEELFIQAGPVV 40
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 145 YTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTKP 267
Y+ P DA+ K FN ++++ V ++P+LK KP
Sbjct: 156 YSGPMDAIPMEKFFNKVILEADKKAVPKGSIDPKLKVDPKP 196
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
NL+I +LP + DL FA FG I+++++
Sbjct: 77 NLFIYHLPQDFGDSDLINTFAPFGGILSAKV 107
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 22 KLIVNYIPEVMTQDMMFSLFSTMGKLESCKL 114
K++V+ I +TQ + S FS GK+ SC L
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCIL 143
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
L V + V T + + +FS GK+ +C+++ +R Y F+E+ +A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 187 NGLLMQNKTLKV 222
+ +L+ ++ + V
Sbjct: 303 DNVLIDDRRIHV 314
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRI 372
L++C L T +DL +F++FG+I N I
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
L V + V T + + +FS GK+ +C+++ +R Y F+E+ +A
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 187 NGLLMQNKTLKV 222
+ +L+ ++ + V
Sbjct: 303 DNVLIDDRRIHV 314
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRI 372
L++C L T +DL +F++FG+I N I
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 25 LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAF 186
L V + V T + + +FS GK+ +C+++ +R Y F+E+ +A
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 187 NGLLMQNKTLKV 222
+ +L+ ++ + V
Sbjct: 234 DNVLIDDRRIHV 245
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRI 372
L++C L T +DL +F++FG+I N I
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEI 203
>Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical
protein C05G5.1 protein.
Length = 456
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = -1
Query: 288 VEIPVGFRFCWWL-KFWIK 235
+ IPVGF CWW+ KF ++
Sbjct: 64 LSIPVGFLACWWIDKFGLR 82
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA-GIAFVLYEHQYEAXRA 426
P K L++ NLPNE+ +L LF+ G I ++ G AF+ + + A A
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESA 166
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 253 PPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA-GIAFVLYEHQYEAXRA 426
P K L++ NLPNE+ +L LF+ G I ++ G AF+ + + A A
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESA 166
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 27.9 bits (59), Expect = 3.2
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +1
Query: 10 ESPTK-LIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVK 171
E P + L V I ++ + F GK++ ++ + RGY F+EY+ +
Sbjct: 100 EDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHT 159
Query: 172 ARKAFNGLLMQNKTLKVSH 228
A K +G+ + K L V +
Sbjct: 160 AYKKADGIKVDGKRLVVDY 178
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +1
Query: 16 PTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKA 174
P+K + V + T+ + +F G++ C L+ +R G+GF+ + +DA A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 175 RKAFNGLLMQNKTLKVSHAL 234
R + ++V +L
Sbjct: 134 RDKLCNTDLDGHKIRVDFSL 153
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Frame = +1
Query: 52 MTQDMMFSLFSTMGKLESCKLIANR------GYGFVEYTRPDDAVKARKAFNGLLMQNKT 213
+++ + ++FS G++ + LI ++ G+ F+ Y + A FNG+ + +
Sbjct: 49 LSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRM 108
Query: 214 LKVSHALLNPELK-PPTKPEAD 276
++V H E K P K +AD
Sbjct: 109 IRVDHV---EEYKVPKYKEDAD 127
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 27.1 bits (57), Expect = 5.6
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 61 DMMFSLFSTMGKLESC-----KLIANRGYGFVEYTRPDDAVKARKAFNGLLMQNKTLKVS 225
D ++ +F GK+ K ++G ++YT P +AV+A NG + ++ L V
Sbjct: 202 DKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVSMLNGQRLFDRNLVVK 261
Query: 226 HALLNPELK 252
+ EL+
Sbjct: 262 MDRFDKELE 270
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 253 PPTKPEADWNLYICNLPNELTLQDLHGLFAQFGRIINSRIAA-GIAFV 393
P K L++ NLPNE+ +L LF+ G I ++ G AF+
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFL 155
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI------AAGIAFVLYEHQYEAXRA 426
N+Y+ N + + L LFA+FG I + + + G FV + + EA A
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETA 208
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 280 NLYICNLPNELTLQDLHGLFAQFGRIINSRI 372
N+Y+ N+P+ +T DL F FG + +I
Sbjct: 201 NVYVSNIPHSVTEDDLLFTFGSFGPLAALKI 231
>Z70312-2|CAA94386.2| 396|Caenorhabditis elegans Hypothetical
protein ZC168.3 protein.
Length = 396
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2
Query: 386 AMPAAMRELIILPNCA-NNPCKS 321
AMP AMR L+I CA NNP +S
Sbjct: 259 AMPLAMRYLLIAAYCASNNPHQS 281
>Z49911-12|CAD30448.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 GPEESPTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG 129
G E+ K++ V I T+D ++++F+ +GK++ K+ + G
Sbjct: 3 GEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEG 46
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 GPEESPTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG 129
G E+ K++ V I T+D ++++F+ +GK++ K+ + G
Sbjct: 3 GEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEG 46
>Z36948-7|CAD30436.1| 137|Caenorhabditis elegans Hypothetical
protein D2089.1b protein.
Length = 137
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 GPEESPTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG 129
G E+ K++ V I T+D ++++F+ +GK++ K+ + G
Sbjct: 3 GEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEG 46
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 GPEESPTKLI-VNYIPEVMTQDMMFSLFSTMGKLESCKLIANRG 129
G E+ K++ V I T+D ++++F+ +GK++ K+ + G
Sbjct: 3 GEEKEKVKILHVANISTSATRDHIYNMFNYLGKIQDLKVYPSEG 46
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
LY+ +P +D+ +G+I N + G AFV +E +A A
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDA 51
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
LY+ +P +D+ +G+I N + G AFV +E +A A
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDA 51
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 283 LYICNLPNELTLQDLHGLFAQFGRIINSRIAAGIAFVLYEHQYEAXRA 426
LY+ +P +D+ +G+I N + G AFV +E +A A
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDA 51
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +1
Query: 16 PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARK 180
P ++ V P T+ + F ++ K++ + +GYGF+ + D A + RK
Sbjct: 65 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRK 124
>AL161712-13|CAC70137.1| 830|Caenorhabditis elegans Hypothetical
protein Y66D12A.17 protein.
Length = 830
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 136 FVEYTRPDDAVKARKAFNGLLMQNKTLKVSHALLNPELKPPTK 264
FV+ DAVK+ K F + M T HAL +L P++
Sbjct: 300 FVQLKNSSDAVKSLKQFFDMSMLEITENSKHALETLKLMSPSQ 342
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +1
Query: 16 PTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIAN-----RGYGFVEYTRPDDAVKARK 180
P ++ V P T+ + F ++ K++ + +GYGF+ + D A + RK
Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIRK 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,365,202
Number of Sequences: 27780
Number of extensions: 176730
Number of successful extensions: 665
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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