Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301B05f
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 222 7e-59
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 28 1.7
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 28 1.7
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 28 1.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 2.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 2.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 2.9
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 3.9
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical pr... 26 6.7
AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical... 26 6.7
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 26 8.9
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 26 8.9
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 26 8.9
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 26 8.9
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 26 8.9
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 222 bits (542), Expect = 7e-59
Identities = 98/118 (83%), Positives = 105/118 (88%)
Frame = +1
Query: 1 GRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLS 180
GRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E LS
Sbjct: 2 GRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLS 61
Query: 181 SEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAF 354
SEALEA RIC NKY+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+
Sbjct: 62 SEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAY 119
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 12 SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 101
SK +P ++ TV ++ CT S DPYLR
Sbjct: 1042 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1071
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical protein
F36H1.2b protein.
Length = 1379
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 12 SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 101
SK +P ++ TV ++ CT S DPYLR
Sbjct: 1013 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1042
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical protein
F36H1.2a protein.
Length = 1398
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 12 SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 101
SK +P ++ TV ++ CT S DPYLR
Sbjct: 1013 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1042
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 58 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 204
R C + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 120 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 19
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 120 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 19
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 120 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 19
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 176 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 211
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 283 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 107
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936
Query: 106 PNRR 95
+++
Sbjct: 1937 HHQK 1940
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 283 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 107
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 700 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 757
Query: 106 PNRR 95
+++
Sbjct: 758 HHQK 761
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -2
Query: 283 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 107
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936
Query: 106 PNRR 95
+++
Sbjct: 1937 HHQK 1940
>Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical
protein T23F6.5 protein.
Length = 575
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 227 TRYLLQQIRPASKASELSCSYSSDTKC 147
T L+ +P K E +C++ DTKC
Sbjct: 423 TAKLIVLNKPKIKCEETNCNFEKDTKC 449
>AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical
protein B0238.9 protein.
Length = 472
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/55 (21%), Positives = 26/55 (47%)
Frame = +2
Query: 38 INRIRNRGSVGVYLIPRSVSSIWVRRERPLTTFHCACTWCPTNMNS*AQRLWRQD 202
+ R+ + GS + +P+ +++W R+ + L C C M Q L+ ++
Sbjct: 82 VKRLASLGSARGWTVPQRRNNLWERKGQSLIGKFCRCRCDRGQMTRDKQALYEKE 136
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 76 PDPKIRIFDLGKKRATVDDFPLCVHLV 156
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 76 PDPKIRIFDLGKKRATVDDFPLCVHLV 156
P PKI IF L + +TVD L V ++
Sbjct: 25 PPPKISIFQLYRYTSTVDRLMLAVGII 51
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
protein F15G9.4b protein.
Length = 5198
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
protein F15G9.4a protein.
Length = 5175
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 67 RGVPDPKIRIFDLGKKRATVDDF 135
RG P PKIR F GK DD+
Sbjct: 727 RGKPHPKIRWFKNGKDLIKPDDY 749
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 25.8 bits (54), Expect = 8.9
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = -3
Query: 225 EVLIAADTSCLQSL*AQLFIFVGHQVHAQWKVVNGRSLLTQIEDTDLGIRYTPTEPRFRI 46
E ++AD S LQ QL + H V + + +LL I T + Y+ E F
Sbjct: 232 ETALSADDSPLQ-FDYQLQYMI-HNVFEHYVIPV--ALLCSILGTIVRFCYSDDENLFGT 287
Query: 45 RFIFAVPVASCWP 7
RF+FAVP + P
Sbjct: 288 RFVFAVPSLTVLP 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,152,846
Number of Sequences: 27780
Number of extensions: 192842
Number of successful extensions: 610
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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