Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A12f
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   1.1  
AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    23   6.1  
AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione S-tran...    23   6.1  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +2

Query: 389 IESKNTEYPVGTLVMGHFGWRTHTITKPENESSVNKTL 502
           I SK     +G ++  HF WR H     E  + V K +
Sbjct: 728 IRSKQAIRYLGVMIHDHFLWRPHVTMAVEKANRVVKVV 765


>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 88  NSSHTAL*ITACSSLIVIQSHQITETFCRKYGYSEKNNSSKP 213
           N  HT + +   +  I+ +SH I     RKYG  E  ++  P
Sbjct: 50  NPKHT-IPVLDDNGTIISESHAIMIYLVRKYGQGEGKDALYP 90


>AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 88  NSSHTAL*ITACSSLIVIQSHQITETFCRKYGYSEKNNSSKP 213
           N  HT + +   +  I+ +SH I     RKYG  E  ++  P
Sbjct: 50  NPKHT-IPVLDDNGTIISESHAIMIYLVRKYGQGEGKDALYP 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,911
Number of Sequences: 2352
Number of extensions: 9821
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)