Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301A11f
(323 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 76 7e-15
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 75 2e-14
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 32 0.11
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 32 0.11
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 27 3.1
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 27 3.1
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 27 3.1
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 3.1
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 27 4.1
U53141-7|AAA96109.1| 82|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 26 5.4
U40802-4|AAK19010.1| 80|Caenorhabditis elegans Hypothetical pr... 26 5.4
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 26 5.4
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 26 5.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 26 7.2
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 26 7.2
U28971-9|AAK68669.1| 90|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 25 9.5
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 25 9.5
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 25 9.5
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 25 9.5
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 75.8 bits (178), Expect = 7e-15
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = +3
Query: 30 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 209
MRYV+AYLLAVLGG P D++ ILS+VG++ADAE K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 210 KLSSMPVG 233
L S+ G
Sbjct: 61 GLVSVSGG 68
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 74.5 bits (175), Expect = 2e-14
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +3
Query: 30 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 209
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 210 KLSSMPVGG 236
KLSS+P GG
Sbjct: 61 KLSSVPSGG 69
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 75 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 194
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 75 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 194
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 190 SCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT*RIF*VLI 14
S +T+ P ++T + S S PT + ST+ AA V+ T+S + + +F VLI
Sbjct: 2254 SVATAGPTGPILTVVPVS---SAPTSGAVSSTATAAPVITTTKTSSVLSVSFSMFIVLI 2309
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +3
Query: 114 SVGIEADAEKLKKVITELNGK---DVEQLI 194
SVG ADA+K K I ++NGK DV++L+
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 326
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +3
Query: 114 SVGIEADAEKLKKVITELNGK---DVEQLI 194
SVG ADA+K K I ++NGK DV++L+
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 309
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +3
Query: 114 SVGIEADAEKLKKVITELNGK---DVEQLI 194
SVG ADA+K K I ++NGK DV++L+
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 309
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -2
Query: 190 SCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYA 44
S ST P+S+ + + + SIP+ S+ + + PPS+ASK A
Sbjct: 436 SISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 1 HVSCQLGLKKCVTWPRIYWLC 63
H CQ G +CV PR W C
Sbjct: 55 HFKCQTGQNQCVPDPRGRWNC 75
>U53141-7|AAA96109.1| 82|Caenorhabditis elegans Hypothetical
protein C14C11.7 protein.
Length = 82
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 4 VSCQLGLKKCVTWPRIYWLCWVARLRQ 84
+ CQ+G ++C TW I RLR+
Sbjct: 1 MDCQIGSRRCATWDEIEDAPQTKRLRE 27
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 30 MRYVAAYLLAVLGGKTTPAAAD-VEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGR 206
++Y ++ L LG T + +E +S++GI+ D ++ KV++ G ++ L A+
Sbjct: 172 LQYNSSVDLKYLGQNVTVTPEEPIESKMSAMGIDDDKKRNSKVVSTAVGYKIQILNASAE 231
Query: 207 EKLSSM 224
S +
Sbjct: 232 GSTSDV 237
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = -2
Query: 238 PPPT--GIDDSFSRPAAIS------CSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 83
PPPT ++ + RP + S SL S +T S ++PT+ I +AAA
Sbjct: 300 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
Query: 82 GVVLPPSTAS 53
V ST +
Sbjct: 360 AVTSAMSTGN 369
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = -2
Query: 238 PPPT--GIDDSFSRPAAIS------CSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 83
PPPT ++ + RP + S SL S +T S ++PT+ I +AAA
Sbjct: 302 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 361
Query: 82 GVVLPPSTAS 53
V ST +
Sbjct: 362 AVTSAMSTGN 371
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = -2
Query: 238 PPPT--GIDDSFSRPAAIS------CSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 83
PPPT ++ + RP + S SL S +T S ++PT+ I +AAA
Sbjct: 300 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
Query: 82 GVVLPPSTAS 53
V ST +
Sbjct: 360 AVTSAMSTGN 369
>U40802-4|AAK19010.1| 80|Caenorhabditis elegans Hypothetical
protein ZC477.4 protein.
Length = 80
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 202 PAAISCSTSLPLSSVITFLSFSASASIPTELRI 104
P A S S+S SS I S S SAS+ ELR+
Sbjct: 11 PGASSSSSSSTASSQIRPPSLSLSASLSEELRV 43
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 99 EKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 239
EK +EAD + ++I + + VE L+ A +E+ VGGG
Sbjct: 101 EKTTFQCEMEADNSGVTEMIEKRYTQHVESLLTARKERKRRHRVGGG 147
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 172 PLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAA 41
PLSS+ + S +A +SI ++ ++ + PPST+S A
Sbjct: 201 PLSSITSISSSAAGSSISAPSTSQPSTTSSLITSPPSTSSSSMA 244
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 25.8 bits (54), Expect = 7.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -2
Query: 208 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYAAT 38
S P +S S+S S+V+T ++ +PT T + + P ST + +T
Sbjct: 462 STPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPST 518
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical protein
F31E3.4 protein.
Length = 1131
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 69 GKTTPAAADVEKILSS---VGIEADAEKLKKVITELNGKDVEQLIAAGR 206
G T+ A +E++ VG++A+ K+K + E +GK V Q+ A GR
Sbjct: 890 GMTSLAVQSLEELPKEKELVGLDAEFIKIKTDLLEFDGKTV-QMRAVGR 937
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 25.8 bits (54), Expect = 7.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 93 DVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 239
DV + V ++ DA K+K I + + +IA REK GGG
Sbjct: 32 DVNSLYDEVMVDMDAFKVKSNIA---WEAINDVIAPNREKRGYAQYGGG 77
>U28971-9|AAK68669.1| 90|Caenorhabditis elegans Hypothetical
protein B0244.11 protein.
Length = 90
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 178 SLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVL 71
SLPL + F+S S+S+S P +F + + + L
Sbjct: 32 SLPLFQFVCFISGSSSSSFPYSQPVFISHTSLTIFL 67
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 187 CSTSLPLSSVITFLSFSASASIPTELRIFSTSA 89
C TS P+S T + +A+A PT R ST++
Sbjct: 195 CCTSGPISPAYTPIGNNANACAPTRSRRTSTAS 227
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 187 CSTSLPLSSVITFLSFSASASIPTELRIFSTSA 89
C TS P+S T + +A+A PT R ST++
Sbjct: 212 CCTSGPISPAYTPIGNNANACAPTRSRRTSTAS 244
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 187 CSTSLPLSSVITFLSFSASASIPTELRIFSTSA 89
C TS P+S T + +A+A PT R ST++
Sbjct: 212 CCTSGPISPAYTPIGNNANACAPTRSRRTSTAS 244
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 187 CSTSLPLSSVITFLSFSASASIPTELRIFSTSA 89
C TS P+S T + +A+A PT R ST++
Sbjct: 195 CCTSGPISPAYTPIGNNANACAPTRSRRTSTAS 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,977,713
Number of Sequences: 27780
Number of extensions: 73244
Number of successful extensions: 331
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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