Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A09f
         (406 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010283-1|AAQ23601.1|  226|Drosophila melanogaster RE04467p pro...    29   2.4  
AE014298-2431|AAF48630.2|  226|Drosophila melanogaster CG9782-PA...    29   2.4  
AE014298-1186|AAF46381.2|  321|Drosophila melanogaster CG15351-P...    27   7.2  

>BT010283-1|AAQ23601.1|  226|Drosophila melanogaster RE04467p
           protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 229 QEYAEYEDE-GDYPADGXXXXXXXXXXXXXXXXGKKLIAGGVRPFRSNNDLLEILXKKRA 405
           +EY E   E GD+  +G                 KK +   +RPFRSN+D L  L +++A
Sbjct: 67  EEYDEETGEHGDHGEEGDEASFASSTTTTTTEAPKK-VGPVIRPFRSNDDFLNSLKRRQA 125


>AE014298-2431|AAF48630.2|  226|Drosophila melanogaster CG9782-PA
           protein.
          Length = 226

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 229 QEYAEYEDE-GDYPADGXXXXXXXXXXXXXXXXGKKLIAGGVRPFRSNNDLLEILXKKRA 405
           +EY E   E GD+  +G                 KK +   +RPFRSN+D L  L +++A
Sbjct: 67  EEYDEETGEHGDHGEEGDEASFASSTTTTTTEAPKK-VGPVIRPFRSNDDFLNSLKRRQA 125


>AE014298-1186|AAF46381.2|  321|Drosophila melanogaster CG15351-PA
           protein.
          Length = 321

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 200 RPQQPQHLRHRNTQSM 247
           +PQ PQH  HRNT +M
Sbjct: 226 QPQYPQHTPHRNTYAM 241


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,494,957
Number of Sequences: 53049
Number of extensions: 208327
Number of successful extensions: 426
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)