Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A08f
         (429 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32)                  28   3.8  
SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025)                  27   8.7  

>SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32)
          Length = 943

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 9   CL-LLKKRHFSIMFPPKIFRGNVSTNKKSAA 98
           CL  LKK H  IMFPPK  R   S + +S A
Sbjct: 529 CLQALKKSHRQIMFPPKPRRPGSSPSIRSVA 559


>SB_50778| Best HMM Match : PA14 (HMM E-Value=0.00025)
          Length = 1266

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = +1

Query: 157 DSCSTWCTRAR*TIKEI*NLNRNYTFYPKCQHMHVSRTNLLH*SYFFVD 303
           D+   WC  A   ++ +     NY   PK Q+ H      +  +  FVD
Sbjct: 583 DASEKWCATAMRLLQRLVGFKTNYESKPKWQYYHKISHESIEKARAFVD 631


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,499,560
Number of Sequences: 59808
Number of extensions: 198558
Number of successful extensions: 295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)