Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A08f
         (429 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   5.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   5.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 79  VDTLPRKIFGGNM 41
           +DTL RKI G N+
Sbjct: 381 IDTLARKILGYNL 393


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 79  VDTLPRKIFGGNM 41
           +DTL RKI G N+
Sbjct: 381 IDTLARKILGYNL 393


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 172  KLNRSQRQIIQIVLEPFSRTKAGNGAADFL 83
            +LNR  +Q+IQ   +  S+ +  +G +  +
Sbjct: 1149 QLNRQGKQVIQTQYQVVSQAQTSSGQSKII 1178


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 68  TAKDFWREHDGKVTFL 21
           TA + W++ +GK+ +L
Sbjct: 195 TAIEIWKQCEGKIDYL 210


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 3   NTCLLLKKRHFSIMFPPKIFRGN 71
           N+C LLKKR+ +  F  ++  G+
Sbjct: 131 NSCDLLKKRNENDPFLKRLITGD 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,492
Number of Sequences: 438
Number of extensions: 2262
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)