Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301A06f
(399 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38084| Best HMM Match : IL15 (HMM E-Value=4.1) 49 2e-06
SB_49069| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 5e-06
SB_31881| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 5e-06
SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 5e-06
SB_29264| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 5e-06
SB_44727| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51) 41 4e-04
SB_44210| Best HMM Match : Ubiq_cyt_C_chap (HMM E-Value=2.3) 40 0.001
SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18) 38 0.003
SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4) 38 0.003
SB_20871| Best HMM Match : Cauli_DNA-bind (HMM E-Value=0.99) 37 0.005
SB_23865| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.037
SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058) 34 0.049
SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4) 33 0.065
SB_4210| Best HMM Match : JTB (HMM E-Value=5.8) 33 0.065
SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23) 33 0.086
SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35) 33 0.086
SB_14711| Best HMM Match : HIM (HMM E-Value=4.9) 31 0.26
SB_4311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.26
SB_11195| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.60
SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5) 29 1.4
SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06) 29 1.4
SB_10069| Best HMM Match : VWC (HMM E-Value=2.4) 28 2.4
SB_37027| Best HMM Match : VWC (HMM E-Value=2.4) 28 2.4
SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14) 28 3.2
SB_44616| Best HMM Match : rve (HMM E-Value=0.012) 27 4.3
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_27524| Best HMM Match : RVT_1 (HMM E-Value=1.30321e-43) 27 5.6
SB_6674| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_2851| Best HMM Match : RVT_1 (HMM E-Value=3.50325e-43) 27 5.6
SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_57633| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.8
SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1) 26 9.8
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 26 9.8
>SB_38084| Best HMM Match : IL15 (HMM E-Value=4.1)
Length = 164
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNL-HIHRFKK 161
F K SD+HN+NT+N H LV+P +R +NSF ++ + +N +P +++ I F
Sbjct: 61 FVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKSITAFSA 120
Query: 160 TIKEHLCNKAYYKVN 116
++E++ N +N
Sbjct: 121 KLREYIHNTVNKFIN 135
>SB_49069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 47.2 bits (107), Expect = 5e-06
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNL-HIHRFKK 161
F K SD+HN+NT+N H LV+P +R +NSF ++ + +N +P +++ I F
Sbjct: 81 FVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKSITAFSA 140
Query: 160 TIKEHL 143
++E++
Sbjct: 141 KLREYI 146
>SB_31881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 47.2 bits (107), Expect = 5e-06
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNL-HIHRFKK 161
F K SD+HN+NT+N H LV+P +R +NSF ++ + +N +P +++ I F
Sbjct: 81 FVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKSITAFSA 140
Query: 160 TIKEHL 143
++E++
Sbjct: 141 KLREYI 146
>SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 47.2 bits (107), Expect = 5e-06
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNL-HIHRFKK 161
F K SD+HN+NT+N H LV+P +R +NSF ++ + +N +P +++ I F
Sbjct: 165 FVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKSITAFSA 224
Query: 160 TIKEHL 143
++E++
Sbjct: 225 KLREYI 230
>SB_29264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 47.2 bits (107), Expect = 5e-06
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNL-HIHRFKK 161
F K SD+HN+NT+N H LV+P +R +NSF ++ + +N +P +++ I F
Sbjct: 61 FVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLEIKEAKSITAFSA 120
Query: 160 TIKEHL 143
++E++
Sbjct: 121 KLREYI 126
>SB_44727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNL-HIHRFKK 161
F K SD+HN+NT+N H LV+P +R +NSF ++ + N +P +++ I F
Sbjct: 61 FVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRLNALPLEIKEAKSITAFSA 120
Query: 160 TIKEHL 143
++E++
Sbjct: 121 KLREYI 126
>SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 45.6 bits (103), Expect = 1e-05
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = -3
Query: 331 FPKMSDIHNRNTRNK--HKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKT 158
F +H+ NTR+ +K + SRL RNSF + R++N++PQ ++ +FK
Sbjct: 92 FTDTKSVHSYNTRSSTSNKFYIQKSRLEIQRNSFSRVGARVWNELPQSLRESSKKQFKTK 151
Query: 157 IKEHLCNKAYYKVNDYLEDC 98
++ L + K +DY++ C
Sbjct: 152 LRSALVD-ILIKYDDYIDVC 170
>SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 44.0 bits (99), Expect = 5e-05
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNL-HIHRFKK 161
F K S++HN+NT+N H LV+P +R +NSF ++ + +N +P ++ I F
Sbjct: 307 FVKCSNVHNKNTKNAANHNLVLPKARTTLAKNSFKFVAAKRWNALPLKIKEAKSITAFSA 366
Query: 160 TIKEHL 143
++E++
Sbjct: 367 KLREYI 372
>SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51)
Length = 604
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = -3
Query: 337 EEFPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSFGCLSVRLYNKIP-QDVQNLHIHRF 167
+ + + SD+HN+ T+N H LV+P +R +NSF ++ + +N +P + + I F
Sbjct: 534 QRYVRCSDVHNKKTKNAANHNLVLPKTRTTLAKNSFKFVAAKRWNALPLESKEAKSITDF 593
Query: 166 KKTIKEHL 143
++E++
Sbjct: 594 SAKLREYI 601
>SB_44210| Best HMM Match : Ubiq_cyt_C_chap (HMM E-Value=2.3)
Length = 368
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = -3
Query: 376 YIFENLMYVRKHIEEFPKMSDIHNRNTRNKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQ 197
Y+F+ L + +H + K+ D HN NTRNK + +P + + + +V+ +N + Q
Sbjct: 289 YVFKCLNGLVEHEMDLLKLEDQHNYNTRNKCNIRLPSVKRNWGKQRTEYHAVKDFNSLSQ 348
Query: 196 DVQN-LHIHRFKKTIKEHL 143
D++ +I FK++I + L
Sbjct: 349 DIKRCTNICTFKRSISQIL 367
>SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18)
Length = 552
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSF 236
F K SD+HN+NT+N H LV+P +R +NSF
Sbjct: 512 FVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSF 545
>SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSF 236
F K SD+HN+NT+N H LV+P +R +NSF
Sbjct: 212 FVKCSDVHNKNTKNAANHNLVLPKARTTLAKNSF 245
>SB_20871| Best HMM Match : Cauli_DNA-bind (HMM E-Value=0.99)
Length = 252
Score = 37.1 bits (82), Expect = 0.005
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 319 SDIHNRNTR--NKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEH 146
+ +H+ NTR +K L P S+ + F +S R + KIP +++L + F + +K H
Sbjct: 187 TQVHSHNTRYASKGNLFRPASKTNYGLTKFTAMSSRFWEKIPNCIKSLPYNSFIEQLKLH 246
Query: 145 LCN 137
L N
Sbjct: 247 LLN 249
>SB_23865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 34.3 bits (75), Expect = 0.037
Identities = 14/52 (26%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = -3
Query: 340 IEEFPKMSDIHNRNTRN-KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQ 188
+++F + +D+H +NTR K+ LV+P + + + +F +L+N +P++ +
Sbjct: 103 MDKFKRFADVHLKNTRQAKNDLVLPRVKHNYGKRTFEYSGAKLWNSLPRETK 154
>SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058)
Length = 333
Score = 33.9 bits (74), Expect = 0.049
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = -3
Query: 364 NLMYVRKHIEEFPKMSDIHNRNTRN-KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQ 188
N+M + +F + +D+H +NTR K+ LV+P + + + +F +L+N +P++ +
Sbjct: 257 NVMASDHLMAKFKRFADVHLKNTRQAKNDLVLPRIKHNYGKRTFEYSGAKLWNSLPRETK 316
>SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 323
Score = 33.5 bits (73), Expect = 0.065
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSF 236
F K SD+HN+NT+N LV+P +R +NSF
Sbjct: 289 FVKCSDVHNKNTKNAANLNLVLPKARTTLAKNSF 322
>SB_4210| Best HMM Match : JTB (HMM E-Value=5.8)
Length = 427
Score = 33.5 bits (73), Expect = 0.065
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSRLHKIRNSF 236
F K SD+HN+NT+N LV+P +R +NSF
Sbjct: 61 FVKCSDVHNKNTKNAANLNLVLPKARTTLAKNSF 94
>SB_25299| Best HMM Match : RVT_1 (HMM E-Value=1.1e-23)
Length = 407
Score = 33.1 bits (72), Expect = 0.086
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = -3
Query: 331 FPKMSDIHNRNTRN--KHKLVVPMSR 260
F K SD+HN+NT+N H LV+P +R
Sbjct: 372 FVKCSDVHNKNTKNAANHNLVLPKAR 397
>SB_4548| Best HMM Match : WD40 (HMM E-Value=6.7e-35)
Length = 844
Score = 33.1 bits (72), Expect = 0.086
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -3
Query: 334 EFPKMSDIHNRNTRN-KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQ 188
+F + +D+H +NTR K+ LV+P + + + +F +L+N +P++ +
Sbjct: 772 KFKRFADVHLKNTRQAKNDLVLPRIKHNYGKRTFEYSGAKLWNSLPRETK 821
>SB_14711| Best HMM Match : HIM (HMM E-Value=4.9)
Length = 282
Score = 31.5 bits (68), Expect = 0.26
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 334 EFPKMSDIHNRNTRN-KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQ 188
+F + +D+ +NTR K+ LV+P + + + +F +L+N +PQ+ +
Sbjct: 39 KFKRFTDVQLKNTRQAKNDLVLPRIKHNYGKRTFEYSGAKLWNSLPQETK 88
>SB_4311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 31.5 bits (68), Expect = 0.26
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -3
Query: 328 PKMSDIHNRNTRN-KHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQ 188
P +D+H +NTR K+ LV+P + + + +F +L+N +P++ +
Sbjct: 82 PGFADVHLKNTRQAKNGLVLPRVKHNYGKRTFEYSDAKLWNSLPRETK 129
>SB_11195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 30.7 bits (66), Expect = 0.46
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 310 HNRNTRNK--HKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNL 182
H R TR+ H LV+P R + +F +V L+N +P ++ L
Sbjct: 210 HERRTRSSTSHNLVLPQPRTDAGKRTFSFSAVSLFNLLPPSLKQL 254
>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 30.3 bits (65), Expect = 0.60
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 349 RKHIEEFPKMSDIHNRNTRNKH--KLVVPMSRLHKIRNSFGCLSVRLYNKIPQ 197
+K + P D R R+ H K + R +NSF C +++ +NK+P+
Sbjct: 333 KKSALKIPDNIDRRTRQLRSSHPDKFIELCPRTEAFKNSFFCRTIKEWNKLPR 385
>SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -3
Query: 310 HNRNTRNK--HKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHLCN 137
H R TR+ H LV+P R +++F +V L+N P ++ L R C
Sbjct: 319 HERRTRSSTSHNLVLPQPRTDAGKSTFSFSAVSLFNLPPPSLKQLADSRILNPKSTTKCY 378
Query: 136 KA 131
K+
Sbjct: 379 KS 380
>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
Length = 294
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 349 RKHIEEFPKMSDIHNRNTRNKH--KLVVPMSRLHKIRNSFGCLSVRLYNKIPQ 197
+K E P D R R+ H K + +NSF C +++ +NK+P+
Sbjct: 224 KKSALEIPDNIDRRTRQLRSSHPDKFIELCPTTEAYKNSFFCRTIKEWNKLPR 276
>SB_18912| Best HMM Match : UCH (HMM E-Value=5.3e-06)
Length = 781
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 250 IRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKE 149
+++++G L + NK DVQ +H+ +FK+ I E
Sbjct: 648 LKSAYGLLCCKR-NKCELDVQRMHLRKFKRQISE 680
>SB_10069| Best HMM Match : VWC (HMM E-Value=2.4)
Length = 289
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 147 CSLIVFLNLCICRF*TSCGILLYRRTDKHPNEFRILCNLLIGTTSLCLFLV-FLLCMS 317
CS+IV + CR +L T +HPN F + L+ +T +C +V L C++
Sbjct: 16 CSIIV--RMLYCRAPEYVRLLYECCTAEHPNMFDYCTSTLLPSTRICSIIVRVLYCLA 71
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 147 CSLIVFLNLCICRF*TSCGILLYRRTDKHPNEFRILCNLLIGTTSLCLFLVFLL 308
CS+IV + CR +L T +HPN F + L+ +T +C +V +L
Sbjct: 192 CSIIV--RVLYCRAPEYARLLYECCTAEHPNMFDYCTSTLLPSTRICSIIVRVL 243
Score = 26.6 bits (56), Expect = 7.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 147 CSLIVFLNLCICRF*TSCGILLYRRTDKHPNEFRILCNLLIGTTSLCLFLVFLL 308
CS+IV + CR +L T +HPN F + ++ +T +C +V +L
Sbjct: 104 CSIIV--RMLYCRAPEYVRLLYECCTAEHPNMFDYCTSAVLPSTRICSIIVRVL 155
>SB_37027| Best HMM Match : VWC (HMM E-Value=2.4)
Length = 289
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 147 CSLIVFLNLCICRF*TSCGILLYRRTDKHPNEFRILCNLLIGTTSLCLFLV-FLLCMS 317
CS+IV + CR +L T +HPN F + L+ +T +C +V L C++
Sbjct: 16 CSIIV--RMLYCRAPEYVRLLYECCTAEHPNMFDYCTSTLLPSTRICSIIVRVLYCLA 71
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 147 CSLIVFLNLCICRF*TSCGILLYRRTDKHPNEFRILCNLLIGTTSLCLFLVFLL 308
CS+IV + CR +L T +HPN F + L+ +T +C +V +L
Sbjct: 192 CSIIV--RVLYCRAPEYARLLYECCTAEHPNMFDYCTSTLLPSTRICSIIVRVL 243
Score = 26.6 bits (56), Expect = 7.4
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 147 CSLIVFLNLCICRF*TSCGILLYRRTDKHPNEFRILCNLLIGTTSLCLFLVFLL 308
CS+IV + CR +L T +HPN F + ++ +T +C +V +L
Sbjct: 104 CSIIV--RMLYCRAPEYVRLLYECCTAEHPNMFDYCTSAVLPSTRICSIIVRVL 155
>SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14)
Length = 812
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 195 SCGILLYRRTDKHPNEFRILCNLLIGTTSLCLFL 296
S G+ LY HP+ +LC +++ SLCL L
Sbjct: 432 SLGLFLY-----HPHNSSVLCQMVVALLSLCLSL 460
>SB_44616| Best HMM Match : rve (HMM E-Value=0.012)
Length = 1189
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 255 IRYEIHSGVCLCACTTKSHKMFRTYIYIGLRK 160
I Y +CL A + + M R Y Y GLRK
Sbjct: 921 IGYAASRLLCLGAASRRPFSMLRVYAYTGLRK 952
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 27.1 bits (57), Expect = 5.6
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -3
Query: 343 HIEEFPKMSDIHNRNTRNKHKLVVPMSRLHKIRNSFGCLSVRLYNKIPQDVQ-NLHIHRF 167
H +E P N+ K L+V + R+H F C K D+ + H+H
Sbjct: 123 HTKEKPFACSTCNKAFATKQTLIVHI-RVHTNERPFVCNECGKAFKTSGDLGVHKHLHSG 181
Query: 166 KKTIKEHLCNKAYYK 122
K+ K C+K + K
Sbjct: 182 KRPFKCEQCDKGFLK 196
>SB_27524| Best HMM Match : RVT_1 (HMM E-Value=1.30321e-43)
Length = 593
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = -3
Query: 373 IFENL-MYVRKHIEEFPKMSD-IHNRNTR-NKHKLVVP-MSRLHKIRNSFGCLSVRLYNK 206
+F+ L + V +++ E K+++ +HNRNTR + + P +R + +F ++R +N
Sbjct: 498 LFKRLQLMVPEYLIETLKLNNTLHNRNTRFSGLNFITPKYTRKTEGGKTFTVNAIRKWNN 557
Query: 205 IPQDVQNL-HIHRFKKTIKEHLCNK 134
+ ++ L +I FK ++ N+
Sbjct: 558 LEASIKKLPNISSFKNALRHKYLNE 582
>SB_6674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 303
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = -3
Query: 373 IFENL-MYVRKHIEEFPKMSD-IHNRNTR-NKHKLVVP-MSRLHKIRNSFGCLSVRLYNK 206
+F+ L + V +++ E K+++ +HNRNTR + + P +R + +F ++R +N
Sbjct: 208 LFKRLQLMVPEYLIETLKLNNTLHNRNTRFSGLNFITPKYTRKTEGGKTFTVNAIRKWNN 267
Query: 205 IPQDVQNL-HIHRFKKTIKEHLCNK 134
+ ++ L +I FK ++ N+
Sbjct: 268 LEASIKKLPNISSFKNALRHKYLNE 292
>SB_2851| Best HMM Match : RVT_1 (HMM E-Value=3.50325e-43)
Length = 890
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = -3
Query: 373 IFENL-MYVRKHIEEFPKMSD-IHNRNTR-NKHKLVVP-MSRLHKIRNSFGCLSVRLYNK 206
+F+ L + V +++ E K+++ +HNRNTR + + P +R + +F ++R +N
Sbjct: 795 LFKRLQLMVPEYLIETLKLNNTLHNRNTRFSGLNFITPKYTRKTEGGKTFTVNAIRKWNN 854
Query: 205 IPQDVQNL-HIHRFKKTIKEHLCNK 134
+ ++ L +I FK ++ N+
Sbjct: 855 LEASIKKLPNISSFKNALRHKYLNE 879
>SB_51128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1880
Score = 26.6 bits (56), Expect = 7.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 270 GTTSLCLFLVFLLCMSDILGNSSICL 347
GTT + L + L C S ++GN+++ L
Sbjct: 866 GTTKVLLLALMLSCSSSLIGNTTVKL 891
>SB_57633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 26.2 bits (55), Expect = 9.8
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -3
Query: 274 VPMSRLHKIRNSFGCLSVRLYNKIPQDVQNLHIHRFKKTIKEHL 143
VP ++IR + VR Y P QNLH HR K K L
Sbjct: 23 VPYQPRYQIRKARIKYLVR-YQNSPMSEQNLHEHRRKSEAKPRL 65
>SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 26.2 bits (55), Expect = 9.8
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 229 LSVRLYNKIPQDVQNLHIHRFKKTIKEHLCNKAYYKVNDYLEDCTKWE*VAR 74
++V L N+ +DV ++ I F+ T + ++ Y+V D L D K E VAR
Sbjct: 190 VTVFLDNQSTRDVTDVEICLFQFTTYIYGTDENEYQVKDRLIDSVKREGVAR 241
>SB_54236| Best HMM Match : bZIP_1 (HMM E-Value=1.1)
Length = 1188
Score = 26.2 bits (55), Expect = 9.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 253 KIRNSFGCLSVRLYNKIPQDVQNLHIHRFK 164
K S LS+ I +DVQNL +H FK
Sbjct: 341 KASKSVELLSLPSNQMINEDVQNLQVHAFK 370
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 349 RKHIEEFPKMSDIHNRNTRNK--HKLVVPMSRLHKIRNSFGCLSVRLYNKIPQ 197
+K + P D R R+ K + R +NSF C +++ +NK+P+
Sbjct: 630 KKSALKIPDNIDRRTRQLRSSLPDKFIELCPRTEAYKNSFFCRTIKEWNKLPR 682
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,948,411
Number of Sequences: 59808
Number of extensions: 247910
Number of successful extensions: 807
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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