Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A06f
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   0.97 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.0  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   5.2  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   5.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   5.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.2  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   6.9  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   6.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   9.1  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 288 LFLVFLLCMSDILGNSSICL 347
           + LV L CM D   NS ICL
Sbjct: 278 VLLVRLACMFDAQTNSMICL 297


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 317 RHLRKLLNMFTNIHQIFK 370
           RH+R  LN   N+H+  K
Sbjct: 91  RHVRDFLNGLDNLHEYLK 108


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 255 IRYEIHSGVCLCACTTKSHKMFRTYIYIGLRKLLKNIC 142
           + Y + SG+ LC   T +  +  T I  G+++     C
Sbjct: 694 LSYVLLSGILLCYLVTFALVLRPTDIVCGIQRFAAGFC 731


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -3

Query: 199 QDVQNLHIHRFKKTIKEHLCNKAYYKVNDYLE 104
           QD      ++ K    E  C KAY  V  Y+E
Sbjct: 89  QDSTKKLFNKCKSIQNEDPCEKAYQLVKCYVE 120


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 261 LLIGTTSLCLFLVFLLCMSDILGNSSICLR 350
           L +   S+ + +  L+CM  ++G+ S CL+
Sbjct: 268 LFLNMASVFMRIFNLICMMLLIGHWSGCLQ 297


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 322 MSDIHNRNTRNKHKLV 275
           ++DIH+RN  N  K++
Sbjct: 17  VTDIHSRNLTNSLKVI 32


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 274 QQACVCS*YFYYVCPTS*ETPQYVYEHTSNFQRCT 378
           + +C+ S   YY    + +  QY+ E +SN Q  T
Sbjct: 376 RNSCLGSTETYYSKHNTQQFTQYIPESSSNLQEKT 410


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 184 LHIHRFKKTIKEHLCNKAY 128
           +HI       K HLC KA+
Sbjct: 34  MHIRTHTLPCKCHLCGKAF 52


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 238 FGCLSVRLY 212
           FGCLS RL+
Sbjct: 275 FGCLSTRLF 283


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 98  HKVGMSCSLREF 63
           H++ + CSL EF
Sbjct: 78  HRINLKCSLVEF 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,178
Number of Sequences: 438
Number of extensions: 2345
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)