Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A04f
         (385 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RRV8 Cluster: PH domain, putative; n=5; Plasmodium (V...    33   1.9  
UniRef50_Q1EU06 Cluster: Putative uncharacterized protein; n=1; ...    32   4.3  
UniRef50_Q05FS6 Cluster: Dihydrodipicolinate reductase; n=1; Can...    32   4.3  
UniRef50_UPI0000499BEE Cluster: Ras guanine nucleotide exchange ...    31   5.7  
UniRef50_Q73RL6 Cluster: Methyl-accepting chemotaxis protein; n=...    31   5.7  
UniRef50_Q9TXN2 Cluster: Putative uncharacterized protein; n=1; ...    31   5.7  
UniRef50_Q5CRI4 Cluster: Putative uncharacterized protein; n=1; ...    31   5.7  
UniRef50_Q8IK84 Cluster: Putative uncharacterized protein; n=2; ...    31   7.5  
UniRef50_Q06673 Cluster: Protein ECM30; n=2; Saccharomyces cerev...    31   7.5  
UniRef50_Q9K7U5 Cluster: Pullulanase; n=1; Bacillus halodurans|R...    31   9.9  

>UniRef50_Q7RRV8 Cluster: PH domain, putative; n=5; Plasmodium
           (Vinckeia)|Rep: PH domain, putative - Plasmodium yoelii
           yoelii
          Length = 800

 Score = 33.1 bits (72), Expect = 1.9
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = -3

Query: 383 FFQWQHFRLXLFRVYYRYIQTFTC*YFFEDIN-YYKNLYSLRVDTLNVIFITNSIFPYRV 207
           FF   H R  +     +YI+ F+   + ED   Y+KN+ SL ++ +N    +N       
Sbjct: 273 FFNIPHLRYFILSKNLKYIRWFSSRKYEEDCKIYFKNINSLEINNMNDHIFSNYQINLLK 332

Query: 206 LL*RCTIQRNMTKK 165
               C I  N  KK
Sbjct: 333 NFTFCIIYNNQKKK 346


>UniRef50_Q1EU06 Cluster: Putative uncharacterized protein; n=1;
           Clostridium oremlandii OhILAs|Rep: Putative
           uncharacterized protein - Clostridium oremlandii OhILAs
          Length = 329

 Score = 31.9 bits (69), Expect = 4.3
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 249 KCYFYYKFNFSLSSIIITVHYTKKYDQKKLFFCCSIDKIASASR 118
           K YFY K N S SS +I   YT+KY  +K+++    DK+    R
Sbjct: 189 KLYFYDK-NLSSSSEMI--EYTEKYTYRKIYYWVEEDKMTKVDR 229


>UniRef50_Q05FS6 Cluster: Dihydrodipicolinate reductase; n=1;
           Candidatus Carsonella ruddii PV|Rep: Dihydrodipicolinate
           reductase - Carsonella ruddii (strain PV)
          Length = 232

 Score = 31.9 bits (69), Expect = 4.3
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -2

Query: 243 YFYYKFNFSLSSIIITVHYTKKYDQ 169
           YF+ KFNF+  SIII +H+ KK D+
Sbjct: 128 YFFLKFNFN--SIIIDIHHNKKKDK 150


>UniRef50_UPI0000499BEE Cluster: Ras guanine nucleotide exchange
           factor; n=1; Entamoeba histolytica HM-1:IMSS|Rep: Ras
           guanine nucleotide exchange factor - Entamoeba
           histolytica HM-1:IMSS
          Length = 1214

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
 Frame = -2

Query: 258 RHPKCYFYYKFNFSLSS----IIITVHYTKKYDQKKLFFCCSID----KIASASRS 115
           R  + YFYY+F+F   S    II+  H+   Y       CC +D     I S+SR+
Sbjct: 654 RFQRSYFYYRFDFKRCSEPLVIILVDHFVCIYQSGTSLRCCPVDYTHFTIVSSSRA 709


>UniRef50_Q73RL6 Cluster: Methyl-accepting chemotaxis protein; n=1;
           Treponema denticola|Rep: Methyl-accepting chemotaxis
           protein - Treponema denticola
          Length = 712

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 379 FNGNILGYXCSEYTIDIFKRLHANIFLKISTII 281
           F+GNI+GY    Y+I+  +R   N F+K + ++
Sbjct: 278 FSGNIIGYSKFLYSIEEIQRSQTNFFIKTAAVL 310


>UniRef50_Q9TXN2 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 463

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -2

Query: 210 SIIITVHYTKKYDQKKLFFCCSIDKIASASRSNDTSVNPVIT 85
           SIIIT  + +KYD   L++ C   +IA++S    T+   V+T
Sbjct: 105 SIIITKQHIEKYDVTCLYYDCKRREIANSSFPTQTAPMSVVT 146


>UniRef50_Q5CRI4 Cluster: Putative uncharacterized protein; n=1;
           Cryptosporidium parvum Iowa II|Rep: Putative
           uncharacterized protein - Cryptosporidium parvum Iowa II
          Length = 140

 Score = 31.5 bits (68), Expect = 5.7
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 175 IFLCIVHRYNNTR*GKIEFVIKITFRVSTLRLYRFL 282
           IFL + HRYN  +  K  + I     VSTL LY +L
Sbjct: 66  IFLALFHRYNGHKLEKALWTILFIILVSTLTLYGYL 101


>UniRef50_Q8IK84 Cluster: Putative uncharacterized protein; n=2;
            Eukaryota|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 5890

 Score = 31.1 bits (67), Expect = 7.5
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -3

Query: 257  DTLNVIFITNSIFPYRVLL*RCTIQRNMTKKNFFF 153
            DTL+   I N ++PY  LL    IQ+N+ K N+FF
Sbjct: 4376 DTLDDSAILNYVYPYHKLL--LFIQKNIQKGNYFF 4408


>UniRef50_Q06673 Cluster: Protein ECM30; n=2; Saccharomyces
           cerevisiae|Rep: Protein ECM30 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 1274

 Score = 31.1 bits (67), Expect = 7.5
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 249 KCYF-YYKFNFSLSSIIITVHYTKKYDQKKLFFCCSIDKIASASRSNDTS 103
           KC+  Y+   F+   II +++Y K YD   L    S  +  S++ SN TS
Sbjct: 463 KCFQNYFADKFASRFIIFSIYYLKYYDYSSLSSSSSTTRSNSSTTSNGTS 512


>UniRef50_Q9K7U5 Cluster: Pullulanase; n=1; Bacillus halodurans|Rep:
           Pullulanase - Bacillus halodurans
          Length = 717

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +2

Query: 14  RSGSIDVNSGGWCDGNL*MTT*LYVITGLTEVSLDREAEAILSMEQQKKSFFW 172
           +  + D+N GG+C GN+ +   L       E   DR ++AI  +E       W
Sbjct: 480 KGSTFDLNKGGFCAGNIELKETLIASMLGHEAQFDRPSQAIQYVEAHDNHTLW 532


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,995,335
Number of Sequences: 1657284
Number of extensions: 5785680
Number of successful extensions: 13068
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13067
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)