Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A04f
         (385 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   3.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   5.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    20   7.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   9.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    20   9.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 243 YFYYKF-NFSLSSIIITVHYTKKYDQKKLFFCCS 145
           YFYY F  F++  +++   Y   Y    L FCC+
Sbjct: 240 YFYYAFILFTVHLLLLVCIYYFYY--MHLLFCCA 271



 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 368 HFRLXLFRVYYRYIQTFTC*YFF 300
           HF L  +  YY +I    C Y+F
Sbjct: 95  HFLLCTYYFYYAFI-ILLCVYYF 116


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 281 KNLYSLRVDTLNVIFITNSIFPYRVLL*RCTIQRNMTKKNFFFAVPLI 138
           KN   L+V      FI   +FP  + + +  +  N TKK +F  + LI
Sbjct: 18  KNFKYLKVLVTFAHFIC--LFPITINIRKNGLNYNFTKKCYFLRMVLI 63


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 281 KNLYSLRVDTLNVIFITNSIFPYRVLL*RCTIQRNMTKK 165
           +NL  + V TL +IF+   I    VLL   T +R   +K
Sbjct: 32  ENLARVEVATLAIIFLVTVIGNSTVLLALWTRRRYAGRK 70


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 281 KNLYSLRVDTLNVIFI 234
           KNLY L +  +NV+++
Sbjct: 97  KNLYYLLLFVINVLYV 112


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 63  RLPSHHPPLLTSIDPERW*PL 1
           ++ S   PL+ S  PER+ PL
Sbjct: 278 QITSAATPLVRSYAPERYPPL 298


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -2

Query: 60  LPSHHPPLLTSIDPERW 10
           LP   PPL    DP  W
Sbjct: 211 LPKWLPPLQGFSDPSAW 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,635
Number of Sequences: 336
Number of extensions: 1624
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)