Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301A03f
(314 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 6e-25
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.049
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 32 0.085
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.085
SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.11
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.26
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.34
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.60
SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.79
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 0.79
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 1.0
SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 28 1.4
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 28 1.4
SB_46136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14) 28 1.8
SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0) 28 1.8
SB_27802| Best HMM Match : Filament (HMM E-Value=0.2) 27 2.4
SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_45719| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_7056| Best HMM Match : Seryl_tRNA_N (HMM E-Value=8.1) 27 2.4
SB_3154| Best HMM Match : DUF812 (HMM E-Value=1.8) 27 2.4
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 27 3.2
SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30) 27 3.2
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 27 4.2
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 27 4.2
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_8482| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 26 5.6
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 26 5.6
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 26 7.4
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_18803| Best HMM Match : KE2 (HMM E-Value=1.5) 26 7.4
SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044) 26 7.4
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_47959| Best HMM Match : rve (HMM E-Value=3e-29) 25 9.8
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 25 9.8
SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 25 9.8
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 25 9.8
SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2) 25 9.8
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 25 9.8
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 109 bits (261), Expect = 6e-25
Identities = 66/99 (66%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Frame = +2
Query: 17 MATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQND 196
MA TLEDK+IW DGEE + EEVLRM TDEIVSR RLLDNEI
Sbjct: 1 MAATLEDKAIWGDGEE-MGEEVLRMSTDEIVSRARLLDNEI------------------- 40
Query: 197 KIKENTEKIKVNKTLPYLVSNVIELLDVDPQE-EEEDGA 310
KEN+EKIKVNKTLPYLVSNVIELLDVDPQ+ EEDGA
Sbjct: 41 --KENSEKIKVNKTLPYLVSNVIELLDVDPQDYAEEDGA 77
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 33.1 bits (72), Expect = 0.049
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 155 EVMRISHELQAQNDKIKENTEKIK-VNKTLPYLVSNVIELLD 277
E+ + +EL+ Q + IKEN EK+K K + L +IEL D
Sbjct: 612 EITELENELEEQREIIKENEEKLKEKEKEIEKLKKKIIELSD 653
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 32.3 bits (70), Expect = 0.085
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +2
Query: 35 DKSIWEDGEEALSEEVLRMPT--DEIVSRTRLLDNEIKIMKSE--VMRISHELQAQNDKI 202
D+ WE+ ++ L M T DE + + E K E + + ++ AQ +I
Sbjct: 391 DREEWEEEQKRLDRAWYDMDTGYDETQNPFADVSEEYTKKKEEKLIKKAVKKMSAQQRQI 450
Query: 203 KENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 310
++ + + N+ L S V++ LDVD EEE+ A
Sbjct: 451 NKDNDMWETNRML---TSGVVQKLDVDEDFEEENEA 483
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 32.3 bits (70), Expect = 0.085
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 125 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVI---ELLDVDPQ 289
++NE K+ ++ V ++H+L + D E E I++ PY + +V+ EL+ V P+
Sbjct: 191 VENEEKVYEALVRWVNHDLSQRRDLFPELLELIRLPLVSPYYLVDVVEKEELMTVSPR 248
>SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 31.9 bits (69), Expect = 0.11
Identities = 26/100 (26%), Positives = 43/100 (43%)
Frame = +2
Query: 2 NHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL 181
N NIT E I +DG+E E++ PT + +L DN ++ E +L
Sbjct: 585 NMNITFKAHREVNRIEQDGQEVQEEQLEDNPTVPLGQEEQLEDNPTVPLEQE-----EQL 639
Query: 182 QAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEE 301
+ E ++++ N T+P +E P E+EE
Sbjct: 640 EDNPTVPLEQEQQLEDNPTVPLEQEEQLEDNPTVPLEQEE 679
>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 30.7 bits (66), Expect = 0.26
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 26 TLEDKSIWEDGEEALSEEVLRMPTDEIVSRTR-LLDNEIKIMKSEVMRISHELQAQNDKI 202
TL+D+ W + E + + + DE++S R + I I V I ++A
Sbjct: 502 TLDDEQGWVEPEPEVDAKRSCLKDDELLSMVRNIKAAHITITGEPVPEIEERMRAMTTAS 561
Query: 203 KENTEKIKVN 232
EN E +K+N
Sbjct: 562 NENKELVKLN 571
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 30.3 bits (65), Expect = 0.34
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +2
Query: 50 EDGEEALSEEVL--RMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI 223
EDG E L E++ R E+ R + L+ E +++ +V + ++ + KIK+ EK+
Sbjct: 408 EDGTE-LEEKIRSQRNRITELERRVKELEKEKNLLEQQVKTMKNKSDDDDKKIKDLNEKV 466
Query: 224 KV-NKTLPYLVSNVIELLDVDPQEEEE 301
+V K L + + L D + + E+E
Sbjct: 467 RVLEKQLKENDAEIQGLKDDNERLEDE 493
Score = 30.3 bits (65), Expect = 0.34
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 98 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLD 277
DE++ + L ++ ++ EV ++ EL+ + ++TEK+ N + ++EL
Sbjct: 716 DELMKQNESLRKKVSKLEDEVRFLNDELREADSSSIKDTEKL--NAEIREFKKKIVELEK 773
Query: 278 -VDPQEEE 298
VD QEEE
Sbjct: 774 LVDDQEEE 781
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +2
Query: 98 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI 223
+ + S R +NEI +K+ + R+ EL++ +++ ++EKI
Sbjct: 105 ESVTSELRGRENEIAELKTSIGRLESELRSLKSELQNSSEKI 146
>SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 59 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEK 220
+ A+ E++ D VS R+ +NE+++ KSE + +Q K + E+
Sbjct: 121 QTAIQLEIVNFNDDSFVSGNRMSNNEVRVTKSESLSSPSNSYSQAFKSNNSREE 174
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.1 bits (62), Expect = 0.79
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 26 TLEDKSIWED---GEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQND 196
+LE+K +D E S E DE+V R L +E+K +K E + ++++ N
Sbjct: 682 SLEEKIRLKDVVIDELKTSLETCSKERDELVESNRNLGSELKALKKENEELVSQVESLNQ 741
Query: 197 KIKE 208
K+++
Sbjct: 742 KVEQ 745
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 197 KIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 304
K+K ++ + NKT + N +E D +P+E EED
Sbjct: 510 KLKSKMKRSEKNKTEELVAVNKVETDDDNPEETEED 545
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.7 bits (61), Expect = 1.0
Identities = 21/94 (22%), Positives = 47/94 (50%)
Frame = +2
Query: 29 LEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 208
+ ++ + E+ E EE +++ + + E+++M + + HE + +++IKE
Sbjct: 2909 ISEEELLEEVEVQRVEEGASHDLEDVPALKESYEEEVEVM---AVGLKHEERVNDEEIKE 2965
Query: 209 NTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 310
EKI +++ N+I+ L+ +EE E A
Sbjct: 2966 KDEKIHLDE------ENIIQDLEETFEEELEVSA 2993
>SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 128 DNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIE 268
D +K + SE ++ EL Q DKI KIK+ P + ++IE
Sbjct: 104 DQPMKKLGSEFETVTGELLTQLDKISRGVRKIKLVSGDPRDIQSLIE 150
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 38 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTE 217
KS+ + G+ + DE+ R L+ E+K +KSE + Q N ++
Sbjct: 224 KSLKKGGDLLFPGASYKRKLDEVAGRLDELEREVKRLKSETCQTKMTCQPCNHQLLMVGP 283
Query: 218 KIKVNKTLP 244
+ + TLP
Sbjct: 284 TVPIPPTLP 292
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 50 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKI 202
++ E L + LR E S+ + LD+E+ + + ++ HELQ + +I
Sbjct: 910 QEAEFELKLDDLRADIQERDSQIKELDSEMAEVTENIAKLQHELQGKGQEI 960
>SB_46136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 89 MPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTEKIKVNKTLPYLVSNVI 265
M TD+ L+ ++ M SE++R+ + A++DK ++ E I+ L+ ++
Sbjct: 76 METDQANQSVSDLEGIVQSMGSEILRLQSLVSAEDDKMLRYKVENIRRKHNYIPLIMEML 135
Query: 266 ELL 274
+LL
Sbjct: 136 KLL 138
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +2
Query: 41 SIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKI--MKSEVMRISHELQAQNDKI---- 202
S W+D +L EV ++ D+ + +++D+E ++ ++S + + L D +
Sbjct: 2603 SDWKDQASSLQSEVAQLKKDKAAAMHKVIDSEEQMIQLRSRLYKTEDSLVRNQDTVKLLS 2662
Query: 203 KENTE 217
KENT+
Sbjct: 2663 KENTD 2667
>SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 44 IWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL 181
I E +E ++ R+ EI+S+T +L ++IK + VMRI E+
Sbjct: 196 IIEGKKEFKLADLGRVTLKEIISKTSVLVSDIKGSRESVMRIPMEI 241
>SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14)
Length = 961
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 95 TDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 232
T+++V + +EI I E ++ HE++ + +I TEK+ V+
Sbjct: 376 TNKVVHEVKGKVSEISIKTDETNKVVHEVKGKVSEISIKTEKMAVD 421
>SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)
Length = 768
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 206 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 310
E ++ + ++T P N +E V P+ EEEDGA
Sbjct: 56 EGEKEDEASETSPRGSENSVESRSVSPKNEEEDGA 90
>SB_27802| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 528
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +2
Query: 74 EEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIK 226
E+ + +EI+ + IK+ + + R+ HE+Q +ND + ++ +++K
Sbjct: 114 EDEIAQEKEEILELKNKHSDSIKLAE-DTNRLLHEVQRKNDSLAKDMKRVK 163
>SB_21874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 26 TLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIK 205
T E+K ++ ++ E + T E +T+ ++ K K + + + DK K
Sbjct: 471 TKENKDKTKENKDKTKEN--KDKTKENKDKTKNNKDKTKENKDKTNENKDKTKENKDKTK 528
Query: 206 ENTEKIKVNKT 238
EN K K NKT
Sbjct: 529 ENKNKTKENKT 539
>SB_45719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Frame = +2
Query: 128 DNEIKIMKSEVMRISHELQ---AQNDKIKENTEK 220
D++I+++KSE+ + S E+Q AQ D++K +K
Sbjct: 274 DDQIQMLKSELEKASTEMQGIAAQVDEVKSQADK 307
>SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +2
Query: 50 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 208
+ E+ + R P D V ++++ E+K+ K+ + H ++ D+ KE
Sbjct: 309 QKSEKEVDASSERAPKDNKVRKSKIKTEELKVPKALEREVGHAKTSKKDESKE 361
>SB_7056| Best HMM Match : Seryl_tRNA_N (HMM E-Value=8.1)
Length = 94
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +2
Query: 125 LDNEIK----IMKSEVMRISHELQAQNDKIKENTEKIK 226
LD E++ +M E R++ ELQAQ DK+ ++++
Sbjct: 22 LDKELEWRRDVMNKEYTRLASELQAQEDKVLNMKQQVQ 59
>SB_3154| Best HMM Match : DUF812 (HMM E-Value=1.8)
Length = 815
Score = 27.5 bits (58), Expect = 2.4
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +2
Query: 32 EDKSIWEDGEEALSEEVLRMPTD------EIVSRTRLLDNEIKIMKSEVMRISHELQAQN 193
+DK I E+ + +EV + D E+V+R RL D E+ ++ + EL N
Sbjct: 618 KDKYIQEELRQLSDKEVYKETKDLTQYITELVNR-RLSDKEVYKETKDLTQYITELV--N 674
Query: 194 DKIKENTEKIKVNKTLPYLVSNVIEL 271
++++ + ++KTL YL+ NV ++
Sbjct: 675 RRVRKLSADGFIDKTLDYLIINVRDM 700
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 59 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK 199
+EA + +RM D+I+++ + L EI ++ M H L+ Q D+
Sbjct: 459 QEADHQSTIRMLQDQILAKEQRLVAEIAEVERSYMETEHMLREQLDE 505
>SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30)
Length = 1440
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 116 TRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEE 295
T LD E+K+ +V++ SH L D N + PY V++ +L V
Sbjct: 631 THTLDKELKLHWLDVLQKSHALHKDGDYSVVNGDDQTDKIRFPYKVADEERMLQVVMGLV 690
Query: 296 EED 304
+ED
Sbjct: 691 DED 693
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 62 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIK 226
EAL L+ ++ + L EI+ +KSEV +++ LQ Q D+++ + +K
Sbjct: 217 EALRARELKANREDYQKKCESLMVEIESLKSEVQQLNSRLQNQ-DELETERKTLK 270
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 98 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 244
DE+ R L+ E+K +KSE + Q N ++ + + TLP
Sbjct: 20 DEVAGRLDELEREVKRLKSETCQTKMTCQPCNHQLLMVGPTVPIPPTLP 68
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 187 SLQLVRDPHHFALHYFDFIVQKSGSTYDFISW 92
+L+ R + H F+F++++ Y F SW
Sbjct: 325 TLKTARHDLEHSAHGFEFVIEQDSMLYGFCSW 356
>SB_8482| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 26.2 bits (55), Expect = 5.6
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +2
Query: 44 IWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI 223
+W+ + +L +++ T+E RTRL + SE R + + K EN
Sbjct: 31 MWKK-KNSLKTLIMKNETEERKKRTRLCQGNVSKRWSESERKNAGRNVEGKKFAENINYE 89
Query: 224 KVN 232
KVN
Sbjct: 90 KVN 92
>SB_56890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1665
Score = 26.2 bits (55), Expect = 5.6
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 89 MPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENT---EKIK-VNKTLPYLVS 256
MPT V RT+L +K+ + EV + Q K++T + +K N L L++
Sbjct: 779 MPTASHVGRTKLDKERLKLCQYEVESVCTSAQELKTSTKDDTHMKDNLKAANALLQRLLN 838
Query: 257 NVIEL 271
+EL
Sbjct: 839 IAVEL 843
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +2
Query: 128 DNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 238
+ E + +++V+ +SHEL+ DK+ E+ K+ +T
Sbjct: 1373 EREARQNETKVISLSHELEEYQDKLAESERLRKLAQT 1409
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 26.2 bits (55), Expect = 5.6
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 32 EDKSIWEDGEEALSEEV--LRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIK 205
E++ + + EE ++EV RM DE + + + EIK K+ + + + N +
Sbjct: 210 EEERVKREEEEKKAKEVEEKRMGEDEEQIKLKEEEVEIKEDKTAELELEETTEKSNHAKR 269
Query: 206 ENTEKIKVNK 235
EN K++K
Sbjct: 270 ENLSPSKIHK 279
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 95 TDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI 223
+D + S R LD E K E R+ ELQ ++E T+K+
Sbjct: 2093 SDRMESLNRRLDTE----KEEGRRLREELQRVRTSLREQTQKV 2131
>SB_25797| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 910
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 50 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEV 160
E+G EE + P+ S RLL +++++ K EV
Sbjct: 655 EEGARGEKEEAVAAPSGSNFSVLRLLGSDVQVKKPEV 691
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 92 PTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKEN 211
PT+ + R R D+EI+ E+ + EL+ Q ++EN
Sbjct: 1647 PTEVVKRRGRRGDSEIQRENIELQKRIAELEIQRKSVEEN 1686
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 25.8 bits (54), Expect = 7.4
Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 128 DNEIKIMKSEVMRISHEL-QAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVD 283
DN++ + + +++++SH+ Q Q+D+ T K + +V L D +
Sbjct: 3017 DNDVGVDEKKILKLSHDFEQIQSDETAVETRKSSFQELNDLVVQEPTTLQDAN 3069
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 128 DNEIKIMKSEVMRISHELQAQNDKI-KENTEKIKVNKTLPYLVSNVIE 268
++E K V+ + +L+A + K+NT+ I N T+ L N+IE
Sbjct: 1404 ESETKDEPQIVVELEKQLEASTRALDKKNTQLIARNNTIKRLELNIIE 1451
>SB_18803| Best HMM Match : KE2 (HMM E-Value=1.5)
Length = 244
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 101 EIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK 235
E+ S+ R L IK +S ELQ ++KE ++++V K
Sbjct: 159 ELSSQCRSLYKRIKQADKNKSDLSMELQVAKGRVKEIQDELEVTK 203
>SB_36758| Best HMM Match : NACHT (HMM E-Value=0.00044)
Length = 899
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +2
Query: 11 ITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQ 190
I +A T+E +++ E+ E +S + +R +N IK ++ + + +
Sbjct: 631 IKLAETIEQRTLIEELELKISCSLTHNAWSYF-ARALSTNNSIKALQPYINKFNPNCDFI 689
Query: 191 NDKIKENTEKIKVN 232
N +KENT K+N
Sbjct: 690 NKVLKENTSIKKLN 703
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 252 TRYGSVLLTLIFSVFSLILSF*AC 181
T Y +VLLTL+ F+++ + AC
Sbjct: 253 TEYSTVLLTLLMLAFAMVAHWLAC 276
>SB_47959| Best HMM Match : rve (HMM E-Value=3e-29)
Length = 622
Score = 25.4 bits (53), Expect = 9.8
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 29 LEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 208
LE + ED E+ ++ + V +DNE + K + +I + N+K+K+
Sbjct: 472 LEQEEQLEDNPTVPLEQEEQLEDNPTVPLEEHIDNEGRKCKRQ--KICESQKTYNEKMKK 529
Query: 209 NTEKIK 226
T+K K
Sbjct: 530 QTQKAK 535
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 134 EIKIMKSEVMRISHELQAQNDKIKENTEKIKV 229
EIK E L + DK K+N EKIK+
Sbjct: 256 EIKSEFDEATTTKESLSLELDKAKKNFEKIKI 287
>SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 25.4 bits (53), Expect = 9.8
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 266 ELLDVDPQEEEEDG 307
+++D+ PQ+EEEDG
Sbjct: 527 DIVDLQPQDEEEDG 540
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 59 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 238
E+ L EE+ DE+ RT +D+EIK +++++ ++ L + + +I V+ T
Sbjct: 107 EQYLPEEL----ADELRKRTTSVDSEIKQLENQMGQLQRTLVKGKARRESIKHRISVSST 162
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 25.4 bits (53), Expect = 9.8
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 32 EDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKEN 211
+ K E+ E+A++E+ R+ S+ L E MKS V ++ +++ Q +K+K
Sbjct: 753 DQKEATENHEQAMTEQRQRLE-----SQIEKLKEENGQMKSTVSGLASDVEMQRNKVKTL 807
Query: 212 TEK 220
E+
Sbjct: 808 REQ 810
>SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2)
Length = 1106
Score = 25.4 bits (53), Expect = 9.8
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 266 ELLDVDPQEEEEDG 307
+++D+ PQ+EEEDG
Sbjct: 982 DIVDLQPQDEEEDG 995
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/59 (20%), Positives = 35/59 (59%)
Frame = +2
Query: 50 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIK 226
+DG+ A ++ + + T+E ++ ++ +NE++ ++ + + E + QN + ++ E +K
Sbjct: 380 DDGDVAQTDGDIPIFTEEFLNYNKVRENELR----KLRKTNREFEEQNAILSKHIENMK 434
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +2
Query: 59 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 238
E+ L EE+ DE+ RT +D+EIK +++++ ++ L + + +I V+ T
Sbjct: 85 EQYLPEEL----ADELRKRTTSVDSEIKQLENQMGQLQRTLVKGKARRESIKHRISVSST 140
>SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 25.4 bits (53), Expect = 9.8
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = +2
Query: 266 ELLDVDPQEEEEDG 307
+++D+ PQ+EEEDG
Sbjct: 22 DIVDLQPQDEEEDG 35
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,996,627
Number of Sequences: 59808
Number of extensions: 111463
Number of successful extensions: 481
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 400488992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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