Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1054.Seq
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4380|AAF56894.2|   98|Drosophila melanogaster CG11500-P...    89   2e-18
AE014297-3120|AAF55972.2|  254|Drosophila melanogaster CG5386-PA...    27   7.0  
X98094-4|CAA66723.1|  758|Drosophila melanogaster l(2)dlt protein.     27   9.2  
X83414-1|CAA58441.1|  758|Drosophila melanogaster lethal(2)denti...    27   9.2  
BT022216-1|AAY54632.1|  480|Drosophila melanogaster IP12394p pro...    27   9.2  
AY121647-1|AAM51974.1|  769|Drosophila melanogaster LD21681p pro...    27   9.2  
AE014297-1174|AAN13480.1|  480|Drosophila melanogaster CG31467-P...    27   9.2  
AE013599-3670|AAF47049.1|  769|Drosophila melanogaster CG11295-P...    27   9.2  

>AE014297-4380|AAF56894.2|   98|Drosophila melanogaster CG11500-PA
           protein.
          Length = 98

 Score = 89.4 bits (212), Expect = 2e-18
 Identities = 41/88 (46%), Positives = 50/88 (56%)
 Frame = +3

Query: 24  IPTHIDYVGQAKAEKLYRAIITLFSIXGFVWGYIVQQFSQSVYXXXXXXXXXXXXTVPPW 203
           I TH+D+ GQ KAE+  R IIT F I G V+G  VQQFSQ+VY            T+PPW
Sbjct: 4   IQTHMDFAGQGKAERWSRFIITFFGIVGLVYGAFVQQFSQTVYILGAGFVLSSLITIPPW 63

Query: 204 PMYRRNPLNWQVPKNGDTNQQPRKERSE 287
           P+YRRN L WQ P + D      +   E
Sbjct: 64  PLYRRNALKWQKPIDTDAKSSSSESGDE 91


>AE014297-3120|AAF55972.2|  254|Drosophila melanogaster CG5386-PA
           protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 228 NWQVPKNGDTNQQPRKERSEIHY 296
           NWQ P+    +QQPR+++ + HY
Sbjct: 78  NWQQPQQQQKHQQPRQQQQQ-HY 99


>X98094-4|CAA66723.1|  758|Drosophila melanogaster l(2)dlt protein.
          Length = 758

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 226 RGLRRYIGHGGTVRMAASRNPAPRIY 149
           RGL  Y+GH  +V+ AA +   P ++
Sbjct: 125 RGLNSYVGHTRSVKSAAFKRTDPAVF 150


>X83414-1|CAA58441.1|  758|Drosophila melanogaster
           lethal(2)denticleless protein.
          Length = 758

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 226 RGLRRYIGHGGTVRMAASRNPAPRIY 149
           RGL  Y+GH  +V+ AA +   P ++
Sbjct: 125 RGLNSYVGHTRSVKSAAFKRTDPAVF 150


>BT022216-1|AAY54632.1|  480|Drosophila melanogaster IP12394p
           protein.
          Length = 480

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 198 PWPMYRRNPLNWQVPKNGDTNQQPRKERSEIHYLKIC 308
           P+ + RR  L  Q+PK G+   +  KE+ E H+ K+C
Sbjct: 355 PYHIIRRPHL--QIPKIGELQMRTMKEKYE-HFYKLC 388


>AY121647-1|AAM51974.1|  769|Drosophila melanogaster LD21681p
           protein.
          Length = 769

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 226 RGLRRYIGHGGTVRMAASRNPAPRIY 149
           RGL  Y+GH  +V+ AA +   P ++
Sbjct: 136 RGLNSYVGHTRSVKSAAFKRTDPAVF 161


>AE014297-1174|AAN13480.1|  480|Drosophila melanogaster CG31467-PA
           protein.
          Length = 480

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 198 PWPMYRRNPLNWQVPKNGDTNQQPRKERSEIHYLKIC 308
           P+ + RR  L  Q+PK G+   +  KE+ E H+ K+C
Sbjct: 355 PYHIIRRPHL--QIPKIGELQMRTMKEKYE-HFYKLC 388


>AE013599-3670|AAF47049.1|  769|Drosophila melanogaster CG11295-PA
           protein.
          Length = 769

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 226 RGLRRYIGHGGTVRMAASRNPAPRIY 149
           RGL  Y+GH  +V+ AA +   P ++
Sbjct: 136 RGLNSYVGHTRSVKSAAFKRTDPAVF 161


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,116,052
Number of Sequences: 53049
Number of extensions: 270725
Number of successful extensions: 901
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)