Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1053.Seq
         (299 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   5.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   5.0  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    20   6.6  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   6.6  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    19   8.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    19   8.7  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    19   8.7  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 88  NASVIIFSCNAASFSALHLCIHGD*KSFI 174
           NAS+ IF     SF    LC   +  +F+
Sbjct: 142 NASLFIFDLIFLSFRCTKLCKEANKTAFL 170


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 46  VXCVIKHVFFI 14
           V C++KH+F I
Sbjct: 68  VGCILKHIFNI 78


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 125 DAALHEKMITLAFIQC 78
           D  LH K + L +I C
Sbjct: 44  DRILHSKRLLLNYINC 59


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 68  HGNDTE*MQVLSFFHATPRRF 130
           H  DT+ + + SF H  P ++
Sbjct: 133 HRPDTQNLDLPSFIHVFPDKY 153


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 125 DAALHEKMITLAFIQC 78
           DA LH K +   ++QC
Sbjct: 31  DAILHNKRLFDNYLQC 46


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -1

Query: 206 SXYRIFIXTSVINDFQSPCIHKCS 135
           S +  F+ T +++DF++     CS
Sbjct: 32  SGFENFVKTYLVSDFENYVTFFCS 55


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 125 DAALHEKMITLAFIQC 78
           DA LH K +   ++QC
Sbjct: 31  DAILHNKRLFDNYLQC 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,753
Number of Sequences: 336
Number of extensions: 914
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)