Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1051.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    30   0.058
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.2  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   5.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.8  

>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 29.9 bits (64), Expect = 0.058
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 5/28 (17%)
 Frame = -2

Query: 508 EIVNQLKKSPK-----TPKQSPRARKAK 440
           E + QL+ SPK     +PKQSPR RKAK
Sbjct: 255 ETLKQLQNSPKGAPKSSPKQSPRQRKAK 282



 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -3

Query: 543 TASEVDXDWLPKKL*INSKNLPR--RRSSRRAQGKQRDQQA 427
           +  +VD +W+P +     +N P+   +SS +   +QR  +A
Sbjct: 243 STKDVDYEWIPSETLKQLQNSPKGAPKSSPKQSPRQRKAKA 283


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 46   TLLYAQLSKLFHKLAHTTQHHLQSHSLSLRNPWL 147
            TL ++Q+ K FH L  T Q + Q         WL
Sbjct: 3192 TLEHSQIDKQFHDLKQTVQEYRQLADNRNSGNWL 3225


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 46   TLLYAQLSKLFHKLAHTTQHHLQSHSLSLRNPWL 147
            TL ++Q+ K FH L  T Q + Q         WL
Sbjct: 3195 TLEHSQIDKQFHDLKQTVQEYRQLADNRNSGNWL 3228


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = -3

Query: 462  RRAQGKQRDQQATTKKSFEVMIKRDIKHKPVVHTSVCEMTEIKIGLQS 319
            ++A+ +QR +    K+  E+M +    HK +V     EM + +  +Q+
Sbjct: 863  KQAEARQRQEIEKDKEKIELMKQEKAAHKTLVDQMEEEMAKARREVQA 910


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -3

Query: 474 RRSSRRAQGKQRDQQATTKKSFEVMIKRDIKHKPVVHTSVCEMTE 340
           +R    A+  +  + A +K+ F      + +H P VH+  C  T+
Sbjct: 334 KRPPGEAENSRDQRMAKSKRKFSQQNCCEQQHLPHVHSEKCAGTQ 378


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/16 (56%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -2

Query: 379 QTGC-SYECVRND*NK 335
           +T C +YEC+RND N+
Sbjct: 142 ETTCMNYECLRNDANE 157


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 163 CNCQNTFFGIKCHECDKKITN 225
           C C+    G KC  CD    N
Sbjct: 415 CQCKPGVTGEKCDRCDSNYFN 435


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,575
Number of Sequences: 2352
Number of extensions: 8526
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)