Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1051.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p pro...    31   0.78 
AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-P...    31   0.78 
X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical p...    28   7.2  
AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA ...    28   7.2  
BT022714-1|AAY55130.1| 1416|Drosophila melanogaster RE66338p pro...    28   9.6  
AF132192-1|AAD34780.1| 1416|Drosophila melanogaster unknown prot...    28   9.6  
AE013599-2122|AAM70965.1| 1416|Drosophila melanogaster CG30085-P...    28   9.6  

>AY069541-1|AAL39686.1|  302|Drosophila melanogaster LD26546p
           protein.
          Length = 302

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -2

Query: 484 SPKTP-KQSPRARKAKRSAGDD 422
           SPK   +QSP+ RK KRSAGDD
Sbjct: 281 SPKAASQQSPKQRKVKRSAGDD 302


>AE014298-1340|AAF46502.1|  302|Drosophila melanogaster CG32701-PA
           protein.
          Length = 302

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -2

Query: 484 SPKTP-KQSPRARKAKRSAGDD 422
           SPK   +QSP+ RK KRSAGDD
Sbjct: 281 SPKAASQQSPKQRKVKRSAGDD 302


>X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical
            protein protein.
          Length = 3429

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 65   SCAYNNVCDCEHYLINKERYN 3
            SC Y ++CD E +++N   +N
Sbjct: 2594 SCIYQSLCDSESFVVNNSAFN 2614


>AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA
            protein.
          Length = 3419

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 65   SCAYNNVCDCEHYLINKERYN 3
            SC Y ++CD E +++N   +N
Sbjct: 2587 SCIYQSLCDSESFVVNNSAFN 2607


>BT022714-1|AAY55130.1| 1416|Drosophila melanogaster RE66338p
           protein.
          Length = 1416

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -3

Query: 480 PRRRSSRRAQGKQRDQQATTKKSFEVMIK--RDIKHKPVVHTSVCEMTEIKI 331
           P+R++  RA  K+ +Q A  + +FE  ++  + +   PVV ++   + + K+
Sbjct: 818 PKRQTRTRAAQKETEQVAQPQPAFEPQLRSPKKLPPSPVVQSTAAAVKQAKV 869


>AF132192-1|AAD34780.1| 1416|Drosophila melanogaster unknown
           protein.
          Length = 1416

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -3

Query: 480 PRRRSSRRAQGKQRDQQATTKKSFEVMIK--RDIKHKPVVHTSVCEMTEIKI 331
           P+R++  RA  K+ +Q A  + +FE  ++  + +   PVV ++   + + K+
Sbjct: 818 PKRQTRTRAAQKETEQVAQPQPAFEPQLRSPKKLPPSPVVQSTAAAVKQAKV 869


>AE013599-2122|AAM70965.1| 1416|Drosophila melanogaster CG30085-PA
           protein.
          Length = 1416

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -3

Query: 480 PRRRSSRRAQGKQRDQQATTKKSFEVMIK--RDIKHKPVVHTSVCEMTEIKI 331
           P+R++  RA  K+ +Q A  + +FE  ++  + +   PVV ++   + + K+
Sbjct: 818 PKRQTRTRAAQKETEQVAQPQPAFEPQLRSPKKLPPSPVVQSTAAAVKQAKV 869


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,035,556
Number of Sequences: 53049
Number of extensions: 402620
Number of successful extensions: 1565
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)