Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1050.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.1  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 130 ISRKCYIYYIVQIT 171
           I+  C +YYI+QIT
Sbjct: 164 INDMCSLYYILQIT 177


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 338 GVFRFDSYSFSNDTFHNVLNGCTKIWHKN 252
           G+ R DS++F+   +  V   C+ +W K+
Sbjct: 290 GIDRADSFNFNPHKWLLVNFDCSTMWLKD 318


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 302 HWKMNMSQIGIHHNLLHCGHAXIGMLLGRP 391
           H+K  +SQ+ I HN +   H  I  +   P
Sbjct: 212 HYKNFLSQVEIIHNEILVTHNEIQTIFSVP 241


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 302 HWKMNMSQIGIHHNLLHCGHAXIGMLLGRP 391
           H+K  +SQ+ I HN +   H  I  +   P
Sbjct: 37  HYKNFLSQVEIIHNEILVTHNEIQTIFSVP 66


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 142 CYIYYIVQITFRHNKIVNVR*LWYYN 219
           C +  +  IT  H KI+ V    Y N
Sbjct: 197 CGVMVVTHITMAHFKIIQVVPYCYIN 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,786
Number of Sequences: 336
Number of extensions: 2321
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)