Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1050.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128434-1|AAM75027.1|  793|Drosophila melanogaster LD02105p pro...    29   2.6  
AE014296-258|AAF47500.2|  793|Drosophila melanogaster CG12084-PA...    29   2.6  
BT015226-1|AAT94455.1|  401|Drosophila melanogaster RE32027p pro...    29   4.6  
AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-P...    29   4.6  

>AY128434-1|AAM75027.1|  793|Drosophila melanogaster LD02105p
           protein.
          Length = 793

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 227 NYKNETLTNFCAIFWYSHLKHYEMCHWKMNMSQIGIHHNLLHCGHAXIGMLLGRPGCLL 403
           N +N TL++        H K + +  W  +M  +G HH L H G +   + LG    LL
Sbjct: 91  NLRNSTLSSIGLETLMRH-KLFALSLWYCDMISVGSHHLLAHYGDSLRSLELGISSHLL 148


>AE014296-258|AAF47500.2|  793|Drosophila melanogaster CG12084-PA
           protein.
          Length = 793

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 227 NYKNETLTNFCAIFWYSHLKHYEMCHWKMNMSQIGIHHNLLHCGHAXIGMLLGRPGCLL 403
           N +N TL++        H K + +  W  +M  +G HH L H G +   + LG    LL
Sbjct: 91  NLRNSTLSSIGLETLMRH-KLFALSLWYCDMISVGSHHLLAHYGDSLRSLELGISSHLL 148


>BT015226-1|AAT94455.1|  401|Drosophila melanogaster RE32027p
           protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 69  NAAEMXQYWPSQNYFXNKCLNIKKMLYIL 155
           NAAEM Q WP+     + C N K+   ++
Sbjct: 250 NAAEMAQNWPNGKMLLSLCYNTKRRALVV 278


>AE014298-1485|AAF46620.2|  638|Drosophila melanogaster CG11556-PA
           protein.
          Length = 638

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 69  NAAEMXQYWPSQNYFXNKCLNIKKMLYIL 155
           NAAEM Q WP+     + C N K+   ++
Sbjct: 487 NAAEMAQNWPNGKMLLSLCYNTKRRALVV 515


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,727,320
Number of Sequences: 53049
Number of extensions: 330955
Number of successful extensions: 514
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)