Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1044.Seq
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;...    57   2e-07
UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella ve...    50   4e-05
UniRef50_Q4YZY1 Cluster: Putative uncharacterized protein; n=4; ...    36   0.38 
UniRef50_Q7F7E2 Cluster: OSJNBa0036E02.9 protein; n=5; Oryza sat...    33   3.6  
UniRef50_Q3BKH8 Cluster: Putative uncharacterized protein; n=4; ...    32   8.2  
UniRef50_Q9VD20 Cluster: CG31169-PA, isoform A; n=5; Schizophora...    32   8.2  
UniRef50_Q5KHX1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  
UniRef50_O74136 Cluster: Phospholipase D; n=3; Candida albicans|...    32   8.2  

>UniRef50_Q9AVH2 Cluster: Putative senescence-associated protein;
           n=4; Eukaryota|Rep: Putative senescence-associated
           protein - Pisum sativum (Garden pea)
          Length = 282

 Score = 57.2 bits (132), Expect = 2e-07
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +1

Query: 370 HQ*GXTNLSHDGLNPAHVPF*WVNNPTLG 456
           HQ G TNLSHDGL PAHVP+ WVNNPTLG
Sbjct: 57  HQWGKTNLSHDGLIPAHVPYWWVNNPTLG 85


>UniRef50_A7RI48 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 746

 Score = 49.6 bits (113), Expect = 4e-05
 Identities = 21/30 (70%), Positives = 25/30 (83%)
 Frame = -3

Query: 356 IVILLSTRGXAVSDXWFMHSAERPVVRSYH 267
           +VILLSTRG A SD W +H AE+P+VRSYH
Sbjct: 660 VVILLSTRGTADSDNWHLHLAEKPMVRSYH 689


>UniRef50_Q4YZY1 Cluster: Putative uncharacterized protein; n=4;
           Eukaryota|Rep: Putative uncharacterized protein -
           Plasmodium berghei
          Length = 54

 Score = 36.3 bits (80), Expect = 0.38
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = -1

Query: 445 DCSPIKREREXGLDRRET 392
           DCSP  RERE GLDRRET
Sbjct: 6   DCSPANRERELGLDRRET 23


>UniRef50_Q7F7E2 Cluster: OSJNBa0036E02.9 protein; n=5; Oryza
           sativa|Rep: OSJNBa0036E02.9 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 498

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 129 RFECETRLVKXH---CLEPPDSRGSTVSISLPDSARLASALEAFRIIPRM 269
           R  C  R +K H   C  PP  R +  S++LP  +RL     A RI+ R+
Sbjct: 425 RLRCRLRCIKLHPGGCFAPPTHRLNAFSLALPSHSRLWLPSAAPRILSRI 474


>UniRef50_Q3BKH8 Cluster: Putative uncharacterized protein; n=4;
           Bacteria|Rep: Putative uncharacterized protein -
           Magnetospirillum gryphiswaldense
          Length = 76

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = -1

Query: 454 QALDCSPIKREREXGLDRRET 392
           Q   CSPIK  RE GL+RRET
Sbjct: 17  QGFGCSPIKVVRELGLERRET 37


>UniRef50_Q9VD20 Cluster: CG31169-PA, isoform A; n=5; Schizophora|Rep:
            CG31169-PA, isoform A - Drosophila melanogaster (Fruit
            fly)
          Length = 1469

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 21/51 (41%), Positives = 28/51 (54%)
 Frame = -1

Query: 244  SKAEASLAESGKDMLTVEPRESGGSKQCXFTSRVSHSKRETRRRSPFGSRR 92
            SK EA +    KD+   EP ES  SK+   TS  S SK+E++R+     RR
Sbjct: 1218 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRKQKRSLRR 1266


>UniRef50_Q5KHX1 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 628

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = -2

Query: 375 LMAXRXDSNT----AQYERXRSFGHXVHALGRAAGGAKLPSAGLS-*TPLR-PKPA*PNP 214
           + A R DS++    A ++  RS G  V  LGR  G  KLPS   S  +P R P P   NP
Sbjct: 38  IFARRRDSHSEAGDADFDPERSLGRLVDELGRVMGSDKLPSRPSSPFSPTRTPTPLGSNP 97


>UniRef50_O74136 Cluster: Phospholipase D; n=3; Candida
           albicans|Rep: Phospholipase D - Candida albicans (Yeast)
          Length = 1710

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 216 DSARLASALEAFRIIPRMVASHHRPLGRVHEPXVRNCGSSRTEQ 347
           D A LA  LE  RI+ R+V +  +PL R+  P +R   + R+++
Sbjct: 327 DLAYLAYKLERTRIVSRVVGNKSQPLPRLPIPPIRKLDNKRSKK 370


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,203,595
Number of Sequences: 1657284
Number of extensions: 7508232
Number of successful extensions: 19148
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19141
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)