Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1037.Seq
(349 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 120 7e-27
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 98 3e-20
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 97 6e-20
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 92 3e-18
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 91 5e-18
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 85 3e-16
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 85 3e-16
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 80 1e-14
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 64 5e-10
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 64 6e-10
UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax... 62 3e-09
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 61 4e-09
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 61 4e-09
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 60 1e-08
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 59 2e-08
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 53 2e-06
UniRef50_A5AGS0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.007
UniRef50_Q2BEX7 Cluster: ATP synthase subunit B; n=2; Bacillus|R... 39 0.027
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 38 0.048
UniRef50_Q0VLP7 Cluster: Acyl-CoA dehydrogenase, putative; n=1; ... 36 0.25
UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta s... 35 0.34
UniRef50_A0DJD2 Cluster: Chromosome undetermined scaffold_53, wh... 31 5.5
UniRef50_A0C7B3 Cluster: Chromosome undetermined scaffold_155, w... 31 5.5
UniRef50_Q82EF8 Cluster: Putative MerR-family transcriptional re... 30 9.5
UniRef50_A6CE69 Cluster: Putative uncharacterized protein; n=1; ... 30 9.5
UniRef50_Q856A9 Cluster: Gp63; n=1; Mycobacterium phage Barnyard... 30 9.5
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 30 9.5
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 120 bits (289), Expect = 7e-27
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPFQVAEVFTGH GKLVP +ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAK
Sbjct: 460 IQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAK 519
Query: 69 ADTLAK 52
AD LA+
Sbjct: 520 ADKLAE 525
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQD KS QDIIA LGMDE SEEDKLTV+RA
Sbjct: 427 ILQDYKSLQDIIAILGMDELSEEDKLTVSRA 457
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 98.3 bits (234), Expect = 3e-20
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = -2
Query: 264 GTXSXIQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIE 85
G IQRFLSQPF VAEVFTG GKLV E+TI+ F ++AG+YDHLPE AFYMVG I+
Sbjct: 415 GRARRIQRFLSQPFHVAEVFTGAPGKLVSLEDTIRSFKAVVAGEYDHLPEGAFYMVGDID 474
Query: 84 EVVAKADTLAKNA 46
E +AKA+ + + A
Sbjct: 475 EAIAKAEKMKQEA 487
Score = 40.3 bits (90), Expect = 0.009
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = -3
Query: 344 LQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
LQ K QDIIA LGMDE SE+DK V RA
Sbjct: 388 LQTYKGLQDIIAILGMDELSEDDKKIVGRA 417
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 97.5 bits (232), Expect = 6e-20
Identities = 47/68 (69%), Positives = 52/68 (76%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
I+RFLSQPF VAEVFTG GKLV E+TIKGF ++ G+YDHLPE AFYMVG IEE V K
Sbjct: 436 IERFLSQPFFVAEVFTGSPGKLVALEDTIKGFKGLVNGEYDHLPEAAFYMVGSIEEAVEK 495
Query: 69 ADTLAKNA 46
A LA A
Sbjct: 496 AKKLAAEA 503
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -3
Query: 344 LQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
LQ K+ QDIIA LGMDE SEEDK+ VARA
Sbjct: 404 LQRYKALQDIIAILGMDELSEEDKIAVARA 433
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 91.9 bits (218), Expect = 3e-18
Identities = 44/73 (60%), Positives = 52/73 (71%)
Frame = -2
Query: 264 GTXSXIQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIE 85
G IQRFLSQPF VAEVFTG GK V E+T++ F +I+ G YD LPE AFYMVG I+
Sbjct: 411 GRARRIQRFLSQPFHVAEVFTGMPGKFVQVEDTVRSFREIIDGKYDDLPENAFYMVGSID 470
Query: 84 EVVAKADTLAKNA 46
E VAKA+ +A A
Sbjct: 471 EAVAKAEKMAAEA 483
Score = 41.1 bits (92), Expect = 0.005
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQ K+ QDIIA LGMDE SE+D+ V RA
Sbjct: 383 ILQRYKNLQDIIAILGMDELSEDDRKVVGRA 413
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/68 (64%), Positives = 52/68 (76%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPF VAEVFTG GKLV ++T+ F +L G YD++PE AFYMVG IE+VVAK
Sbjct: 443 IQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVAK 502
Query: 69 ADTLAKNA 46
A+ LA A
Sbjct: 503 AEKLAAEA 510
Score = 46.4 bits (105), Expect = 1e-04
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = -3
Query: 344 LQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
LQ KS QDIIA LGMDE SE+DKLTV RA
Sbjct: 411 LQTYKSLQDIIAILGMDELSEQDKLTVERA 440
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 85.0 bits (201), Expect = 3e-16
Identities = 42/68 (61%), Positives = 49/68 (72%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFL+QP VAE F+G G VP +ETI+GF +IL G YD LPE AFYMVG I+E V K
Sbjct: 403 IQRFLTQPTHVAERFSGIPGVYVPIKETIRGFKEILEGRYDDLPEAAFYMVGTIDEAVEK 462
Query: 69 ADTLAKNA 46
A L K+A
Sbjct: 463 AKKLMKSA 470
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
+LQ K QDIIA LGM+E SEEDKL V RA
Sbjct: 370 VLQRYKDLQDIIAILGMEELSEEDKLIVQRA 400
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 85.0 bits (201), Expect = 3e-16
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPF VAE+FTG GK V +E I F +L G YD L E +FYMVG I+EVVAK
Sbjct: 490 IQRFLSQPFHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVAK 549
Query: 69 ADTLAKNA 46
A+ +AK +
Sbjct: 550 AEKIAKES 557
Score = 49.2 bits (112), Expect = 2e-05
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
+LQ+ K+ QDIIA LGMDE SE+DKLTVARA
Sbjct: 457 VLQNYKNLQDIIAILGMDELSEDDKLTVARA 487
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 79.8 bits (188), Expect = 1e-14
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
+QRFLSQPF VAE FTG G +V E+TIKGF IL G+ D+LPE AF VG IEE + K
Sbjct: 436 VQRFLSQPFTVAEQFTGVPGAMVAIEDTIKGFKMILDGEVDYLPEPAFLNVGTIEEAIEK 495
Query: 69 ADTLAKNA*K 40
L + A K
Sbjct: 496 GKKLLEQANK 505
Score = 37.1 bits (82), Expect = 0.083
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQ K QDII+ LGM+E S+ D+L V RA
Sbjct: 403 ILQRNKELQDIISILGMEELSDADRLVVNRA 433
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 64.5 bits (150), Expect = 5e-10
Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGD-YDHLPEVAFYMVGPIEEVVA 73
IQRFLSQPF VAE FTG G LV ++TIKGF +L D PE AF + G IEE +
Sbjct: 433 IQRFLSQPFHVAEQFTGLTGALVDIKDTIKGFKMLLDDDSLLKYPEPAFNLKGTIEEAIE 492
Query: 72 KADTLAKNA 46
+ + K A
Sbjct: 493 AGEQMLKEA 501
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 344 LQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
LQ QDIIA LG+DE S++D+ V +A
Sbjct: 401 LQRYNELQDIIAILGLDELSDDDRKVVNKA 430
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 64.1 bits (149), Expect = 6e-10
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
I++FL+QPF V+E FTG G V + ++G +IL G+++H+PE F VG IEE + K
Sbjct: 612 IRKFLTQPFVVSEKFTGQKGVFVTLNDALRGMERILTGEFNHIPETYFAYVGTIEEALEK 671
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARAVXFR 243
IL+ KS +DII LG D SE D+ TV A R
Sbjct: 579 ILEKSKSLEDIINILGFDALSEADRKTVRIARIIR 613
>UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax
polyedra|Rep: ATP synthase beta chain - Gonyaulax
polyedra (Dinoflagellate)
Length = 253
Score = 62.1 bits (144), Expect = 3e-09
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEV 79
++RFLSQPF VAE+FT G+ V TI GFSKI+ GD D E +FY+ G I+++
Sbjct: 153 VERFLSQPFFVAEIFTRIQGRYVSLGNTIFGFSKIIKGDLDTFMEGSFYLKGAIDDI 209
Score = 35.9 bits (79), Expect = 0.19
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
I+Q K QD+IA LG++E S++D++ V RA
Sbjct: 120 IMQRYKELQDVIAILGLEELSDQDRIIVDRA 150
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 61.3 bits (142), Expect = 4e-09
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = -2
Query: 240 FLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADT 61
FL+QPF VAE F+G GK V ++++KG IL GD +H+P F VG +EE++ K +
Sbjct: 703 FLTQPFVVAEKFSGVPGKFVRLKDSLKGIKTILDGDLNHIPVSYFSFVGVVEEIIEKFNL 762
Query: 60 LAK 52
AK
Sbjct: 763 DAK 765
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 61.3 bits (142), Expect = 4e-09
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = -2
Query: 264 GTXSXIQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIE 85
G +QRFL+QPF V E FTG G+ V +T+ G ILAG+ D E + YMVG +E
Sbjct: 398 GRARRLQRFLTQPFAVTEAFTGMPGRSVALADTLAGCRAILAGECDDWQERSLYMVGTLE 457
Query: 84 EVVAKAD 64
E A+ +
Sbjct: 458 EARAREE 464
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
I++ +S QD+I+ LG++E + ED+ V RA
Sbjct: 370 IIEHYRSLQDVISLLGIEELAVEDRRIVGRA 400
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 59.7 bits (138), Expect = 1e-08
Identities = 30/65 (46%), Positives = 37/65 (56%)
Frame = -2
Query: 264 GTXSXIQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIE 85
G +QRFL+QPF V E FTG AG V +TI G IL GD D E + YMVG ++
Sbjct: 428 GRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLD 487
Query: 84 EVVAK 70
+ K
Sbjct: 488 DARRK 492
Score = 31.1 bits (67), Expect = 5.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
+++ + QD+IA LG+DE +D+ V RA
Sbjct: 400 VIEHYRELQDVIALLGIDELGADDRRLVGRA 430
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 59.3 bits (137), Expect = 2e-08
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEE 82
I+RFLSQPF VAEVF+ GK V EE + GF IL G YD E FY+ G + +
Sbjct: 493 IERFLSQPFFVAEVFSRTPGKYVKVEEALDGFDGILTGRYDDRAEADFYLQGAMSD 548
Score = 35.1 bits (77), Expect = 0.34
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -3
Query: 344 LQDXKSXQDIIAXLGMDEXSEEDKLTVAR 258
L K QD+IA LG+DE SE D+L+V R
Sbjct: 461 LNRYKELQDLIAILGLDELSESDRLSVLR 489
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEE 82
+QR+LSQPF V ++ TG GK V E T+ L GDYD E A YM G +++
Sbjct: 417 LQRYLSQPFHVTKLQTGMEGKSVSLEHTLTDCESFLRGDYDEFSEEACYMRGAMDK 472
>UniRef50_A5AGS0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 316
Score = 40.7 bits (91), Expect = 0.007
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
+LQ+ K+ QD IA L MDE SE DKL VARA
Sbjct: 154 VLQNYKNLQDCIATLRMDELSENDKLIVARA 184
>UniRef50_Q2BEX7 Cluster: ATP synthase subunit B; n=2; Bacillus|Rep:
ATP synthase subunit B - Bacillus sp. NRRL B-14911
Length = 371
Score = 38.7 bits (86), Expect = 0.027
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYD 127
++ +L+QPF AE FTG G+ V +E + KIL G D
Sbjct: 310 LEAYLTQPFYTAEAFTGQKGQSVSLQENLSDVRKILDGGAD 350
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 37.9 bits (84), Expect = 0.048
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDY-DHLPEVAFYMVG 94
+Q F +Q F AE FT G VP ETI+ +IL G Y PE+ F VG
Sbjct: 404 LQNFFTQRFFTAENFTKEKGVYVPLNETIESVIRILEGKYLKQSPEI-FSFVG 455
Score = 31.9 bits (69), Expect = 3.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQ + +DII+ LG DE E+ K+ V +A
Sbjct: 371 ILQKYQELEDIISILGFDELEEDSKIIVKKA 401
>UniRef50_Q0VLP7 Cluster: Acyl-CoA dehydrogenase, putative; n=1;
Alcanivorax borkumensis SK2|Rep: Acyl-CoA dehydrogenase,
putative - Alcanivorax borkumensis (strain SK2 / ATCC
700651 / DSM 11573)
Length = 764
Score = 35.5 bits (78), Expect = 0.25
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -2
Query: 156 FSKILAGDYDHLPE-VAFYMVGPIEEVVAKADTLA 55
F KILA +YD LPE Y+ GP+EE++ AD+ A
Sbjct: 44 FEKILAENYDTLPEHEQAYIDGPVEELLRMADSYA 78
>UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta
subunit; n=1; uncultured bacterium eBACred22E04|Rep:
Predicted F0F1-type ATP synthase beta subunit -
uncultured bacterium eBACred22E04
Length = 198
Score = 35.1 bits (77), Expect = 0.34
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEET 166
IQR+LSQ F VAE TG GK V ++T
Sbjct: 165 IQRYLSQTFYVAETITGRPGKYVSLKDT 192
>UniRef50_A0DJD2 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_53,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 591
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 248 FRGSSHNXSK*LRCSLDMRVN*YHXRKLSKDSPKF*QGTMIICQK*HS 105
++ S HN S L+ S + RVN +H L DS + ++ QK HS
Sbjct: 12 YKDSFHNHSSCLKSSQEERVNSFHLMTLFLDSEHYLMAKVMNTQKMHS 59
>UniRef50_A0C7B3 Cluster: Chromosome undetermined scaffold_155, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_155, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 5133
Score = 31.1 bits (67), Expect = 5.5
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 43 LSILSKSISFGHNLLNRSNHVECYFW-QMIIVPC*NFGESFDSFLXWY 183
LS+L K + FG+ LL EC QM+I +GE + ++ WY
Sbjct: 2279 LSLLKK-LQFGNKLLQLMKKAECPIKVQMLIQEIPQYGEIINKYIHWY 2325
>UniRef50_Q82EF8 Cluster: Putative MerR-family transcriptional
regulator; n=2; Streptomyces|Rep: Putative MerR-family
transcriptional regulator - Streptomyces avermitilis
Length = 253
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 192 GKLVPXEETIKGFSKILAGDYDHLPEVAFYM-VG-PIEEVVAKAD 64
G LVP E + G + D D L ++ FY +G P+EEV A D
Sbjct: 26 GLLVPGERSHAGHRRYNDADLDRLQQILFYRELGFPLEEVAALLD 70
>UniRef50_A6CE69 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative uncharacterized
protein - Planctomyces maris DSM 8797
Length = 1558
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 144 LAGDYDHLPEVAFYMVGPIEEVVAKADTLAKNA 46
+AGD DHL + G +E+V AKAD + + A
Sbjct: 938 MAGDTDHLVTTKSLIAGLMEKVTAKADRVDREA 970
>UniRef50_Q856A9 Cluster: Gp63; n=1; Mycobacterium phage
Barnyard|Rep: Gp63 - Mycobacterium phage Barnyard
Length = 112
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 174 EETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAKADTL 58
EE ++ K + D DHL EV ++G +EE A +
Sbjct: 16 EELVQFLQKTITNDTDHLEEVLIDLLGTVEETRANGQNV 54
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 30.3 bits (65), Expect = 9.5
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVG 94
++ + SQ +A +T G EE + KI+ G Y +PE F +G
Sbjct: 396 LKNYFSQNLFMASSYTKKPGFFADKEEMLDEIEKIVDGHYIDIPEYKFLYLG 447
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,193,689
Number of Sequences: 1657284
Number of extensions: 4015747
Number of successful extensions: 6954
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6954
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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