Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV1037.Seq
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    25   0.22 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    25   0.29 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      24   0.39 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      24   0.39 

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 25.0 bits (52), Expect = 0.22
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 147 ILAGDYDHLPEVAFYMV--GPIEEVVAKADT 61
           I +GDY+H+P +  Y    G I E++ K +T
Sbjct: 291 IKSGDYNHVPMIFGYTTREGMIVEMMRKTET 321


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 168 TIKGFSKILAGDYDHLPEVAFYMV--GPIEEVVAKADT 61
           T +  + I +GDY+H+P +  Y    G I E++ K +T
Sbjct: 286 TDEPIATIKSGDYNHVPMIFGYTTREGMIVEMMRKNET 323


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 147 ILAGDYDHLPEVAFYMV--GPIEEVVAKADT 61
           I +GDY+H+P +  Y    G I E++ K +T
Sbjct: 291 IKSGDYNHVPMIFGYTTREGMIVEMMRKNET 321


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -2

Query: 147 ILAGDYDHLPEVAFYMV--GPIEEVVAKADT 61
           I +GDY+H+P +  Y    G I E++ K +T
Sbjct: 293 IKSGDYNHVPMIFGYTTREGMIVEMMRKNET 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,357
Number of Sequences: 336
Number of extensions: 1118
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)