Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV1037.Seq
(349 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312) p... 120 1e-27
X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for ... 120 1e-27
M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit... 120 1e-27
M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein. 120 1e-27
D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein. 120 1e-27
BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+ transp... 120 1e-27
DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP synth... 95 4e-20
AY288421-1|AAP72130.1| 462|Homo sapiens G protein-coupled recep... 29 3.0
AB196530-1|BAD97441.1| 462|Homo sapiens G protein-coupled recep... 29 3.0
>X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312)
protein.
Length = 312
Score = 120 bits (289), Expect = 1e-27
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPFQVAEVFTGH GKLVP +ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAK
Sbjct: 243 IQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAK 302
Query: 69 ADTLAK 52
AD LA+
Sbjct: 303 ADKLAE 308
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQD KS QDIIA LGMDE SEEDKLTV+RA
Sbjct: 210 ILQDYKSLQDIIAILGMDELSEEDKLTVSRA 240
>X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for
F1-ATPase beta subunit (F-1 beta). ).
Length = 539
Score = 120 bits (289), Expect = 1e-27
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPFQVAEVFTGH GKLVP +ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAK
Sbjct: 470 IQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAK 529
Query: 69 ADTLAK 52
AD LA+
Sbjct: 530 ADKLAE 535
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQD KS QDIIA LGMDE SEEDKLTV+RA
Sbjct: 437 ILQDYKSLQDIIAILGMDELSEEDKLTVSRA 467
>M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit
precursor protein.
Length = 529
Score = 120 bits (289), Expect = 1e-27
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPFQVAEVFTGH GKLVP +ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAK
Sbjct: 460 IQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAK 519
Query: 69 ADTLAK 52
AD LA+
Sbjct: 520 ADKLAE 525
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQD KS QDIIA LGMDE SEEDKLTV+RA
Sbjct: 427 ILQDYKSLQDIIAILGMDELSEEDKLTVSRA 457
>M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein.
Length = 529
Score = 120 bits (289), Expect = 1e-27
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPFQVAEVFTGH GKLVP +ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAK
Sbjct: 460 IQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAK 519
Query: 69 ADTLAK 52
AD LA+
Sbjct: 520 ADKLAE 525
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQD KS DIIA LGMDE SEEDKLTV+RA
Sbjct: 427 ILQDYKSLHDIIAILGMDELSEEDKLTVSRA 457
>D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein.
Length = 539
Score = 120 bits (289), Expect = 1e-27
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPFQVAEVFTGH GKLVP +ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAK
Sbjct: 470 IQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAK 529
Query: 69 ADTLAK 52
AD LA+
Sbjct: 530 ADKLAE 535
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQD KS QDIIA LGMDE SEEDKLTV+RA
Sbjct: 437 ILQDYKSLQDIIAILGMDELSEEDKLTVSRA 467
>BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, beta polypeptide
protein.
Length = 529
Score = 120 bits (289), Expect = 1e-27
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
IQRFLSQPFQVAEVFTGH GKLVP +ETIKGF +ILAG+YDHLPE AFYMVGPIEE VAK
Sbjct: 460 IQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVAK 519
Query: 69 ADTLAK 52
AD LA+
Sbjct: 520 ADKLAE 525
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQD KS QDIIA LGMDE SEEDKLTV+RA
Sbjct: 427 ILQDYKSLQDIIAILGMDELSEEDKLTVSRA 457
>DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP
synthase, H+ transporting F1 complex beta subunit
protein.
Length = 445
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPXEETIKGFSKILAGDYDHLPEVAFYM 100
IQRFLSQPFQVAEVFTGH GKLVP +ETIKGF +ILAG+YDHLPE AFYM
Sbjct: 396 IQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYM 445
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -3
Query: 347 ILQDXKSXQDIIAXLGMDEXSEEDKLTVARA 255
ILQD KS QDIIA LGMDE SEEDKLTV+RA
Sbjct: 363 ILQDYKSLQDIIAILGMDELSEEDKLTVSRA 393
>AY288421-1|AAP72130.1| 462|Homo sapiens G protein-coupled receptor
142 protein.
Length = 462
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 329 SXQDIIAXLGMDEXSEEDKLTVARAVXFRGSSHNXSK*LRCSLDMRVN*YHXR-KLSKDS 153
S QDI A LG + +EEDK V+ A + S + S+ LR S + + R + SKDS
Sbjct: 18 SLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLR-SPQVTGGSWDLRIRPSKDS 76
Query: 152 PKF*Q 138
F Q
Sbjct: 77 SSFRQ 81
>AB196530-1|BAD97441.1| 462|Homo sapiens G protein-coupled receptor
protein.
Length = 462
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 329 SXQDIIAXLGMDEXSEEDKLTVARAVXFRGSSHNXSK*LRCSLDMRVN*YHXR-KLSKDS 153
S QDI A LG + +EEDK V+ A + S + S+ LR S + + R + SKDS
Sbjct: 18 SLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLR-SPQVTGGSWDLRIRPSKDS 76
Query: 152 PKF*Q 138
F Q
Sbjct: 77 SSFRQ 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,971,235
Number of Sequences: 237096
Number of extensions: 646834
Number of successful extensions: 1614
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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